3p21.31

Chromosome 3 3p21.31 Clickable Image Map of Human Genome
  General Information   Top   Help
expander General Information: Available
Organism Human
Points of Interest rs333; rs11711054
Karyotype Band Location 3p21.31
Chromosomal Location (GRCh37) Chr3:45980673-46654132
Region Size 0.67 Mb
Orthologous Regions Mouse: Human 3p21.31 Orthologous Region
Mouse: Human 3p21.31 Orthologous Region
Rat: Human 3p21.31 Orthologous Region
Rat: Human 3p21.31 Orthologous Region
Genes in Region (13) CCR1, CCR2, CCR3, CCR5, CCRL2, CXCR6, FYCO1, LOC100506485, LRRC2, LTF, RTP3, TDGF1, XCR1

View this region in the Human T1D Regions table.

  Query T1DMart for overlapping human marker information from T1DMart   Top   Help
expander Non-Synonymous SNPs in region dbSNP134:
  Region Overview   Top   Help
expander (Human) GRCh37 - chr3:45980673..46654132 (673.46 kb)  View in Genome Browser
  Genes in LD Region   Top   Help
expander Genes in LD Region: Available
Summary data derived from GWA meta analysis Barrett et al. LD regions were calculated using different r² and D' threshold values, and these regions were then examined for genes. The definition of a gene location includes a 3kb flanking region either side of the gene.
Marker Data Region Data Links
r2 Threshold D' Threshold Region Genes
         
Marker rs11711054
Chr3
Position46345611
Strand
P-Value1.69e-05
N/A 0.5 chr3: 46263244..46543325 CCR3 CCR5 LTF CCR2 RTP3 CCRL2
LD Region Feature File
LD File
0.4 N/A chr3: 46272456..46404163 CCR3 CCR2
0.8 N/A chr3: 46278670..46402627 CCR3 CCR2
1 N/A chr3: 46343534..46401032 CCR2
  Publications   Top   Help
expander Publications: 2
  Signal Clouds   Top   Help
expander Signal Clouds: Available
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