4p15.2

General Information Top Help

General Information: Available

Organism	Human
Points of Interest	rs10517086
Karyotype Band Location	4p15.2
Chromosomal Location (GRCh37)	Chr4:26028805-26136773
Region Size	0.11 Mb
Orthologous Regions	Mouse: Human 4p15.2 Orthologous Region Rat: Human 4p15.2 Orthologous Region
Genes in Region (0)

View this region in the Human T1D Regions table.

Query T1DMart for overlapping human marker information from T1DMart Top Help

Non-Synonymous SNPs in region dbSNP134:

Region Overview Top Help

(Human) GRCh37 - chr4:26028805..26136773 (107.97 kb) View in Genome Browser

An overview of the region is provided by GBrowse. Tracks shown include gene information and study-specific data:
Immune Disease Associated Variants	Variants shown to be associated with different auto-immune diseases
P-values, -log(p)	1 degree of freedom p-values, stratified by geographic location. Generated using snpMatrix with data from the T1DGC Meta-analysis study.
HapMap Recobination Data	Genome-wide recombination rate from Phase 2 HapMap estimated from phased haplotypes in HapMap Release 22 (NCBI 36). Units are in cM/Mb, coordinates have been projected to the current build.

Genes in LD Region Top Help

Genes in LD Region: Available

Summary data derived from GWA meta analysis Barrett et al. LD regions were calculated using different r² and D' threshold values, and these regions were then examined for genes. The definition of a gene location includes a 3kb flanking region either side of the gene.

Marker Data

Region Data

Links

r² Threshold

D' Threshold

Region

Genes