SKAP2

  Summary from T1DBase   Top   Help
Gene Description:   src family associated phosphoprotein 2; src kinase associated phosphoprotein 2
Synonyms:   AA960083, RA70, SCAP2, SAPS, MGC33304, Saps, 2610021A10Rik, MGC10411, BB137539, mSKAP55R, SKAP55R, Scap55r, PRAP, Scap2, Skap2, SKAP2, SKAP-HOM
Orthologs:   Human SKAP2 (protein-coding), Mouse Skap2 (protein-coding), Rat Skap2 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1 Rat: 2
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
7p15.2 Human chr7:26657962..27205282 0.55 75 rs7804356
expander Other Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr7:26706681..27034858 (328.18 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr6:51809164..51962548 (153.38 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr4:80149846..80300111 (150.26 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Low Moderate High High High Low Low Moderate HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for SKAP2:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
KEGG Network: None available
Biocarta: None available
expander Reactome: 3
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 9
  Publications   Top   Help
expander Type 1 Diabetes Publications: 2
expander Publications: 53
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:1889206 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 8935 54353 155183
EnsEMBL Gene(s) ENSG00000005020 ENSMUSG00000059182 ENSRNOG00000012228
Unigene Hs.200770 Mm.221479 Rn.162747
Homologene SKAP2 Skap2 Skap2
OMIM 605215 N/A N/A
GeneCards SKAP2 N/A N/A
Beta Cell Genomics DT.121507741 DT.452743 DT.95169448 DT.101725886 DT.491962 DT.55213107 N/A
Reactome O75563 N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:1889206 N/A
WikiGenes 8935 54353 155183
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
View this page in archive site