MAP1LC3B
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(Human) GRCh37 - chr16:87425406..87438385 (12.98 kb) View in Genome Browser
(Mouse) NCBIM37 - chr8:124114368..124121947 (7.58 kb) View in Genome Browser
(Rat) RGSC3.4 - chr19:51841333..51856951 (15.62 kb) View in Genome Browser
HaemAtlas Expression Table for MAP1LC3B:
Expression Legend
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Cell Types Showing Expression: Available
Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
| Human | Mouse | Rat | ||||||||||
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| ductal cells | exocrine pancreas | pancreatic islets | primary beta cells | Pancreatic Islets MPSS | beta cell line | pancreatic islets | whole pancreas | alpha cell | beta cell line | pancreatic islets | primary beta cells | whole pancreas |
Expression Legend
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The Beta Cell Gene Atlas is a collection of almost all available public microarray data generated with pancreatic beta cells and related cell lines and types. The expression data comes from 131 array analyses derived from 28 experiments (open details in a new window). The basal (untreated cell) expression signal intensity values in each array were converted to ranks within the experiments; the highest value was used for genes represented by more than one probe. The rank values of genes in a given cell type were averaged with other calculated values from experiments performed with the same cell type. The rank transformation of the expression values enable comparison of gene expression across different organisms and tissues.
A red border around a cell indicates greater certainty in the data; specifically, the gene has >0.95 probability of being expressed in the tissue.
Tissues Showing Expression: Available
| Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Expression Legend
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| Signal intensity values were converted to ranks within the experiments. For genes represented by more than one probeset, we averaged the intensity signals for each probeset across all tissues and chose the probeset with the highest average value. The rank transformation of the expression values enables comparison of gene expression across different organisms and tissues. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interactions Table for MAP1LC3B:The MAP1LC3B interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.
The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.
| Interactor | Interactor | Sources | Classification | Pubmed IDs |
| MAP1LC3B | PDCD6 | IntAct | empirical | 20562859 |
| MAP1LC3B | HUWE1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PDIA6 | IntAct | empirical | 20562859 |
| MAP1LC3B | TRAP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TRIM28 | IntAct | empirical | 20562859 |
| MAP1LC3B | SLC25A13 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPR | IntAct | empirical | 20562859 |
| MAP1LC3B | DNAJA2 | IntAct | empirical | 20562859 |
| MAP1LC3B | TFG | IntAct | empirical | 20562859 |
| MAP1LC3B | TUBB4B | IntAct | empirical | 20562859 |
| MAP1LC3B | SEC23A | IntAct | empirical | 20562859 |
| MAP1LC3B | SYNCRIP | IntAct | empirical | 20562859 |
| MAP1LC3B | CARM1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DDX17 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG7 | HPRD, IntAct, BioGRID | empirical | 11890701 16303767 18083104 20562859 |
| MAP1LC3B | CCT7 | IntAct | empirical | 20562859 |
| MAP1LC3B | CCT2 | IntAct | empirical | 20562859 |
| MAP1LC3B | PRPF8 | IntAct | empirical | 20562859 |
| MAP1LC3B | AHSA1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PAICS | IntAct | empirical | 20562859 |
| MAP1LC3B | IGF2BP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPH1 | IntAct | empirical | 20562859 |
| MAP1LC3B | RUVBL2 | IntAct | empirical | 20562859 |
| MAP1LC3B | PRDX3 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPA0 | IntAct | empirical | 20562859 |
| MAP1LC3B | NUDT21 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPUL1 | IntAct | empirical | 20562859 |
| MAP1LC3B | RASSF1 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT71 | IntAct | empirical | 20562859 |
| MAP1LC3B | PHB2 | IntAct | empirical | 20562859 |
| MAP1LC3B | GABARAP | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | U2AF2 | IntAct | empirical | 20562859 |
| MAP1LC3B | GABARAPL2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ADD1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | CLTA | BioGRID | empirical | 21900206 |
| MAP1LC3B | CLTC | IntAct | empirical | 20562859 |
| MAP1LC3B | RPTN | IntAct | empirical | 20562859 |
| MAP1LC3B | NCOA7 | IntAct | empirical | 20562859 |
| MAP1LC3B | FUNDC1 | IntAct | empirical | 20562859 |
| MAP1LC3B | AAMP | BioGRID | empirical | 21900206 |
| MAP1LC3B | CSTA | IntAct | empirical | 20562859 |
| MAP1LC3B | CTPS | IntAct | empirical | 20562859 |
| MAP1LC3B | FAM91A1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DYX1C1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DBI | BioGRID | empirical | 21900206 |
| MAP1LC3B | DBN1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | DDX1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DDX3X | IntAct | empirical | 20562859 |
| MAP1LC3B | DDX5 | IntAct | empirical | 20562859 |
| MAP1LC3B | DHX9 | IntAct | empirical | 20562859 |
| MAP1LC3B | DLAT | IntAct | empirical | 20562859 |
| MAP1LC3B | DYNC1H1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DNMT3B | BioGRID | empirical | 21900206 |
| MAP1LC3B | DOCK1 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | DOK1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DSG1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DSP | IntAct | empirical | 20562859 |
| MAP1LC3B | AHCY | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF1A1 | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF1A2 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT24 | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF1B2 | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF1D | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF1G | IntAct | empirical | 20562859 |
| MAP1LC3B | EEF2 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT78 | IntAct | empirical | 20562859 |
| MAP1LC3B | ELAVL1 | IntAct | empirical | 20562859 |
| MAP1LC3B | ENO1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TUBB | IntAct | empirical | 20562859 |
| MAP1LC3B | EPS8 | BioGRID | empirical | 21900206 |
| MAP1LC3B | ALB | IntAct | empirical | 20562859 |
| MAP1LC3B | EWSR1 | IntAct | empirical | 20562859 |
| MAP1LC3B | ALDH1B1 | IntAct | empirical | 20562859 |
| MAP1LC3B | FASN | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPA3 | IntAct | empirical | 20562859 |
| MAP1LC3B | FOXK1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA4L | IntAct | empirical | 20562859 |
| MAP1LC3B | WDFY3 | IntAct | empirical | 18083104 20417604 |
| MAP1LC3B | TBC1D2B | IntAct | empirical | 20562859 |
| MAP1LC3B | TNRC6B | IntAct | empirical | 20562859 |
| MAP1LC3B | CUL9 | IntAct | empirical | 20562859 |
| MAP1LC3B | FLG | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG2A | IntAct | empirical | 20562859 |
| MAP1LC3B | FLNB | IntAct | empirical | 20562859 |
| MAP1LC3B | FLNC | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG4B | HPRD, MINT, IntAct, BioGRID | empirical | 16169070 18083104 20562859 21900206 |
| MAP1LC3B | NUP210 | IntAct | empirical | 20562859 |
| MAP1LC3B | FBXW11 | IntAct | empirical | 20562859 |
| MAP1LC3B | ADNP | BioGRID | empirical | 21900206 |
| MAP1LC3B | SRRM2 | IntAct | empirical | 20562859 |
| MAP1LC3B | CORO1C | IntAct | empirical | 20562859 |
| MAP1LC3B | MKRN1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | RABGAP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | FUS | IntAct | empirical | 20562859 |
| MAP1LC3B | XRCC6 | IntAct | empirical | 20562859 |
| MAP1LC3B | SAMHD1 | IntAct | empirical | 20562859 |
| MAP1LC3B | GAPDH | IntAct | empirical | 20562859 |
| MAP1LC3B | UPF2 | HPRD, IntAct | empirical | 15231747 |
| MAP1LC3B | SERBP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PHGDH | IntAct | empirical | 20562859 |
| MAP1LC3B | GBAS | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | DAZAP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | GFAP | IntAct | empirical | 20562859 |
| MAP1LC3B | AMPD1 | IntAct | empirical | 20562859 |
| MAP1LC3B | RBMXL2 | IntAct | empirical | 20562859 |
| MAP1LC3B | RBMX | IntAct | empirical | 20562859 |
| MAP1LC3B | GLO1 | IntAct | empirical | 20562859 |
| MAP1LC3B | GPI | IntAct | empirical | 20562859 |
| MAP1LC3B | RASSF3 | IntAct | empirical | 20562859 |
| MAP1LC3B | ZNF326 | IntAct | empirical | 20562859 |
| MAP1LC3B | SLC25A5 | IntAct | empirical | 20562859 |
| MAP1LC3B | SLC25A6 | IntAct | empirical | 20562859 |
| MAP1LC3B | GSTP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TMOD3 | BioGRID | empirical | 21900206 |
| MAP1LC3B | TRA2A | IntAct | empirical | 20562859 |
| MAP1LC3B | GYS1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HIST1H1C | IntAct | empirical | 20562859 |
| MAP1LC3B | HSD17B10 | IntAct | empirical | 20562859 |
| MAP1LC3B | HADHA | IntAct | empirical | 20562859 |
| MAP1LC3B | HADHB | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | HTT | IntAct | empirical | 20417604 |
| MAP1LC3B | HNRNPA1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPA2B1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPAB | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPC | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPD | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPF | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPH1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPH2 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPH3 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPK | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPL | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPU | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA1L | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA4 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA5 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA6 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA7 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA8 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPA9 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPB1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSP90AB1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSPD1 | IntAct | empirical | 20562859 |
| MAP1LC3B | IARS | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRNPCL1 | IntAct | empirical | 20562859 |
| MAP1LC3B | ACTBL2 | IntAct | empirical | 20562859 |
| MAP1LC3B | FOXK2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ILF2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ILF3 | IntAct | empirical | 20562859 |
| MAP1LC3B | JUP | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT77 | IntAct | empirical | 20562859 |
| MAP1LC3B | KCNH2 | IntAct | empirical | 20562859 |
| MAP1LC3B | IPO5 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT1 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT2 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT5 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT9 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT10 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT13 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT14 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT16 | IntAct | empirical | 20562859 |
| MAP1LC3B | FLG2 | IntAct | empirical | 20562859 |
| MAP1LC3B | HSP90AB2P | IntAct | empirical | 20562859 |
| MAP1LC3B | LGALS3BP | IntAct | empirical | 20562859 |
| MAP1LC3B | NBR1 | IntAct | empirical | 19250911 20562859 |
| MAP1LC3B | MAP1A | IntAct, BioGRID | empirical | 18083104 20562859 |
| MAP1LC3B | MAP1B | IntAct, BioGRID | empirical | 18083104 20562859 |
| MAP1LC3B | MCM3 | IntAct | empirical | 20562859 |
| MAP1LC3B | MIF | IntAct | empirical | 20562859 |
| MAP1LC3B | MMP2 | IntAct | empirical | 20562859 |
| MAP1LC3B | NUDT1 | IntAct | empirical | 20562859 |
| MAP1LC3B | MYBL2 | BioGRID | empirical | 21900206 |
| MAP1LC3B | HNRNPM | IntAct | empirical | 20562859 |
| MAP1LC3B | NCL | IntAct | empirical | 20562859 |
| MAP1LC3B | NEDD4 | IntAct | empirical | 20562859 |
| MAP1LC3B | NFKB1 | IntAct | empirical | 20562859 |
| MAP1LC3B | NHP2L1 | IntAct | empirical | 21988832 |
| MAP1LC3B | NPM1 | IntAct | empirical | 20562859 |
| MAP1LC3B | NUP88 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATP5A1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PRDX1 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATP5B | IntAct | empirical | 20562859 |
| MAP1LC3B | KLHL5 | BioGRID | empirical | 21900206 |
| MAP1LC3B | PCMT1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PCNA | IntAct | empirical | 20562859 |
| MAP1LC3B | DYNC1LI1 | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT76 | IntAct | empirical | 20562859 |
| MAP1LC3B | DDX41 | IntAct | empirical | 20562859 |
| MAP1LC3B | ANKFY1 | IntAct | empirical | 20562859 |
| MAP1LC3B | C22orf28 | IntAct | empirical | 20562859 |
| MAP1LC3B | PDHB | IntAct | empirical | 20562859 |
| MAP1LC3B | LUC7L2 | HPRD, MINT, IntAct, BioGRID | empirical | 16169070 20562859 21900206 |
| MAP1LC3B | PFN1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PHB | IntAct | empirical | 20562859 |
| MAP1LC3B | PKM2 | IntAct | empirical | 20562859 |
| MAP1LC3B | PLEC | IntAct | empirical | 20562859 |
| MAP1LC3B | DNAJC10 | IntAct | empirical | 20562859 |
| MAP1LC3B | FAM190B | BioGRID | empirical | 21900206 |
| MAP1LC3B | PPIA | IntAct | empirical | 20562859 |
| MAP1LC3B | TMEM160 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | PPP1CC | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG16L1 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | PPP2R1A | IntAct | empirical | 20562859 |
| MAP1LC3B | MAP1S | IntAct | empirical | 20562859 |
| MAP1LC3B | RCBTB1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PEF1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TMA16 | IntAct | empirical | 20562859 |
| MAP1LC3B | PRKAR1A | IntAct | empirical | 20562859 |
| MAP1LC3B | ARFGAP1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | CENPJ | IntAct | empirical | 20562859 |
| MAP1LC3B | PRKCI | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | PRKDC | IntAct | empirical | 20562859 |
| MAP1LC3B | YLPM1 | IntAct | empirical | 20562859 |
| MAP1LC3B | CCBL2 | IntAct | empirical | 20562859 |
| MAP1LC3B | YAE1D1 | IntAct | empirical | 20562859 |
| MAP1LC3B | DDX24 | IntAct | empirical | 20562859 |
| MAP1LC3B | PTBP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | LRRC47 | IntAct | empirical | 20562859 |
| MAP1LC3B | WDR48 | IntAct | empirical | 20562859 |
| MAP1LC3B | NCOA5 | IntAct | empirical | 20562859 |
| MAP1LC3B | RAD1 | MINT, IntAct | empirical | 16169070 |
| MAP1LC3B | ACTA2 | IntAct | empirical | 20562859 |
| MAP1LC3B | RANBP2 | IntAct | empirical | 20562859 |
| MAP1LC3B | RAP1GAP | BioGRID | empirical | 21900206 |
| MAP1LC3B | KLHL12 | IntAct | empirical | 20562859 |
| MAP1LC3B | ACTB | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL4 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL8 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL11 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL12 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL21 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL22 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL23A | IntAct | empirical | 20562859 |
| MAP1LC3B | RPL38 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPLP0 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPLP1 | IntAct, BioGRID | empirical | 20562859 21900206 |
| MAP1LC3B | RPLP2 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS3 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS4X | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS8 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS14 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS20 | IntAct | empirical | 20562859 |
| MAP1LC3B | RPS27A | IntAct | empirical | 20562859 |
| MAP1LC3B | SAFB | IntAct, BioGRID | empirical | 20562859 21900206 |
| MAP1LC3B | RNF123 | IntAct | empirical | 20562859 |
| MAP1LC3B | XPNPEP3 | IntAct | empirical | 20562859 |
| MAP1LC3B | LEPRE1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SFPQ | IntAct | empirical | 20562859 |
| MAP1LC3B | SRSF1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SRSF7 | IntAct | empirical | 20562859 |
| MAP1LC3B | MAP1LC3B2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG3 | HPRD, IntAct, BioGRID | empirical | 16303767 18083104 20562859 |
| MAP1LC3B | DGAT2L7 | IntAct | empirical | 20562859 |
| MAP1LC3B | ANAPC1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SHMT1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TBC1D15 | IntAct | empirical | 20562859 |
| MAP1LC3B | SLC16A1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SMARCB1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | SNCA | IntAct | empirical | 20417604 |
| MAP1LC3B | SNRPB | IntAct | empirical | 20562859 |
| MAP1LC3B | SNRPC | IntAct | empirical | 20562859 |
| MAP1LC3B | SNRPD1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SNRPD3 | IntAct | empirical | 20562859 |
| MAP1LC3B | SNRPE | IntAct | empirical | 20562859 |
| MAP1LC3B | SPTAN1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SPTBN1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TRIM21 | IntAct | empirical | 20562859 |
| MAP1LC3B | SSB | IntAct | empirical | 20562859 |
| MAP1LC3B | SSBP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | STK3 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | STK4 | IntAct | empirical | 20562859 |
| MAP1LC3B | TAF7 | BioGRID | empirical | 21900206 |
| MAP1LC3B | TCP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | PRDX2 | IntAct | empirical | 20562859 |
| MAP1LC3B | TGM3 | IntAct | empirical | 20562859 |
| MAP1LC3B | TIA1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TIAL1 | IntAct | empirical | 20562859 |
| MAP1LC3B | C1QBP | IntAct | empirical | 20562859 |
| MAP1LC3B | CCT3 | IntAct | empirical | 20562859 |
| MAP1LC3B | TTN | IntAct | empirical | 20562859 |
| MAP1LC3B | TUBA4A | IntAct | empirical | 20562859 |
| MAP1LC3B | TUBB2A | IntAct | empirical | 20562859 |
| MAP1LC3B | TUFM | IntAct | empirical | 20562859 |
| MAP1LC3B | TXN | IntAct | empirical | 20562859 |
| MAP1LC3B | TPI1P1 | IntAct | empirical | 20562859 |
| MAP1LC3B | VARS | IntAct | empirical | 20562859 |
| MAP1LC3B | VIM | IntAct | empirical | 20562859 |
| MAP1LC3B | XRCC5 | IntAct | empirical | 20562859 |
| MAP1LC3B | ZNF207 | IntAct | empirical | 20562859 |
| MAP1LC3B | DAP3 | IntAct | empirical | 20562859 |
| MAP1LC3B | CAD | IntAct | empirical | 20562859 |
| MAP1LC3B | KXD1 | HPRD, MINT, IntAct, BioGRID | empirical | 16189514 |
| MAP1LC3B | FAM134A | BioGRID | empirical | 21900206 |
| MAP1LC3B | FYCO1 | IntAct | empirical | 20562859 |
| MAP1LC3B | FAM65A | BioGRID | empirical | 21900206 |
| MAP1LC3B | UBA5 | IntAct | empirical | 20562859 |
| MAP1LC3B | BRD3 | BioGRID | empirical | 21900206 |
| MAP1LC3B | THAP7 | BioGRID | empirical | 21900206 |
| MAP1LC3B | TUBB1 | IntAct | empirical | 20562859 |
| MAP1LC3B | TAF15 | IntAct | empirical | 20562859 |
| MAP1LC3B | MAP1LC3B | IntAct | empirical | 20562859 |
| MAP1LC3B | CLTCL1 | IntAct | empirical | 20562859 |
| MAP1LC3B | CAPZB | IntAct | empirical | 20562859 |
| MAP1LC3B | RASSF5 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG10 | IntAct | empirical | 20562859 |
| MAP1LC3B | KBTBD7 | HPRD, MINT, IntAct, BioGRID | empirical | 16169070 20562859 21900206 |
| MAP1LC3B | ULK1 | IntAct | empirical | 20562859 |
| MAP1LC3B | CASP8 | BioGRID | empirical | 21900206 |
| MAP1LC3B | NSMAF | IntAct | empirical | 20562859 |
| MAP1LC3B | MAP1LC3A | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | TUBA1C | IntAct | empirical | 20562859 |
| MAP1LC3B | NIPSNAP1 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | CSDA | IntAct | empirical | 20562859 |
| MAP1LC3B | PDXK | IntAct | empirical | 20562859 |
| MAP1LC3B | EED | BioGRID | empirical | 21900206 |
| MAP1LC3B | GMPS | IntAct | empirical | 20562859 |
| MAP1LC3B | GGH | IntAct | empirical | 20562859 |
| MAP1LC3B | SQSTM1 | HPRD, MINT, IntAct, BioGRID | empirical | 16169070 18083104 19250911 20562859 21900206 |
| MAP1LC3B | HERC2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG16L2 | IntAct | empirical | 20562859 |
| MAP1LC3B | STBD1 | IntAct | empirical | 20562859 |
| MAP1LC3B | KBTBD6 | IntAct | empirical | 20562859 |
| MAP1LC3B | SPAG9 | BioGRID | empirical | 21900206 |
| MAP1LC3B | CCT6A | IntAct | empirical | 20562859 |
| MAP1LC3B | KRT75 | IntAct | empirical | 20562859 |
| MAP1LC3B | AIFM1 | IntAct | empirical | 20562859 |
| MAP1LC3B | NEK9 | IntAct | empirical | 20562859 |
| MAP1LC3B | BUB3 | IntAct | empirical | 20562859 |
| MAP1LC3B | TIMM50 | IntAct | empirical | 20562859 |
| MAP1LC3B | MRFAP1 | BioGRID | empirical | 21900206 |
| MAP1LC3B | ATG5 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | BAG4 | IntAct | empirical | 20562859 |
| MAP1LC3B | RBM39 | IntAct | empirical | 20562859 |
| MAP1LC3B | SEC24C | IntAct | empirical | 20562859 |
| MAP1LC3B | FNIP1 | IntAct | empirical | 20562859 |
| MAP1LC3B | SAFB2 | IntAct | empirical | 20562859 |
| MAP1LC3B | CLINT1 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | ULK2 | IntAct | empirical | 20562859 |
| MAP1LC3B | ATG13 | IntAct | empirical | 20562859 |
| MAP1LC3B | MATR3 | IntAct | empirical | 20562859 |
| MAP1LC3B | KEAP1 | IntAct, BioGRID | empirical | 20562859 |
| MAP1LC3B | TECPR2 | IntAct | empirical | 20562859 |
| MAP1LC3B | IQSEC1 | IntAct | empirical | 20562859 |
| MAP1LC3B | HNRPDL | IntAct | empirical | 20562859 |
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Publications: 76
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Autophagy proteins regulate the secretory component of osteoclastic bone resorption.
DeSelm CJ, Miller BC, Zou W, Beatty WL, van Meel E, Takahata Y, Klumperman J, Tooze SA, Teitelbaum SL, Virgin HW
Dev Cell. 2011
PubMed ID: 22055344
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Atg8 transfer from Atg7 to Atg3: a distinctive E1-E2 architecture and mechanism in the autophagy pathway.
Taherbhoy AM, Tait SW, Kaiser SE, Williams AH, Deng A, Nourse A, Hammel M, Kurinov I, Rock CO, Green DR, Schulman BA
Mol Cell. 2011
PubMed ID: 22055190
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Homeodomain interacting protein kinase 2 regulates postnatal development of enteric dopaminergic neurons and glia via BMP signaling.
Chalazonitis A, Tang AA, Shang Y, Pham TD, Hsieh I, Setlik W, Gershon MD, Huang EJ
J Neurosci. 2011
PubMed ID: 21957238
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A directed protein interaction network for investigating intracellular signal transduction.
Vinayagam A, Stelzl U, Foulle R, Plassmann S, Zenkner M, Timm J, Assmus HE, Andrade-Navarro MA, Wanker EE
Sci Signal. 2011
PubMed ID: 21900206
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Modulation of autophagy influences development and apoptosis in mouse embryos developing in vitro.
Lee SE, Hwang KC, Sun SC, Xu YN, Kim NH
Mol Reprod Dev. 2011
PubMed ID: 21681844
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A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature. 2011
PubMed ID: 21677750
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Behavioral and other phenotypes in a cytoplasmic Dynein light intermediate chain 1 mutant mouse.
Banks GT, Haas MA, Line S, Shepherd HL, Alqatari M, Stewart S, Rishal I, Philpott A, Kalmar B, Kuta A, Groves M, Parkinson N, Acevedo-Arozena A, Brandner S, Bannerman D, Greensmith L, Hafezparast M, Koltzenburg M, Deacon R, Fainzilber M, Fisher EM
J Neurosci. 2011
PubMed ID: 21471385
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Developmental regulation of MURF ubiquitin ligases and autophagy proteins nbr1, p62/SQSTM1 and LC3 during cardiac myofibril assembly and turnover.
Perera S, Holt MR, Mankoo BS, Gautel M
Dev Biol. 2011
PubMed ID: 21185285
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Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome.
Nakahira K, Haspel JA, Rathinam VA, Lee SJ, Dolinay T, Lam HC, Englert JA, Rabinovitch M, Cernadas M, Kim HP, Fitzgerald KA, Ryter SW, Choi AM
Nat Immunol. 2011
PubMed ID: 21151103
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Autophagic protein LC3B confers resistance against hypoxia-induced pulmonary hypertension.
Lee SJ, Smith A, Guo L, Alastalo TP, Li M, Sawada H, Liu X, Chen ZH, Ifedigbo E, Jin Y, Feghali-Bostwick C, Ryter SW, Kim HP, Rabinovitch M, Choi AM
Am J Respir Crit Care Med. 2011
PubMed ID: 20889906
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Reduced expression of LC3B-II and Beclin 1 in glioblastoma multiforme indicates a down-regulated autophagic capacity that relates to the progression of astrocytic tumors.
Huang X, Bai HM, Chen L, Li B, Lu YC
J Clin Neurosci. 2010
PubMed ID: 20863706
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Autophagy protein microtubule-associated protein 1 light chain-3B (LC3B) activates extrinsic apoptosis during cigarette smoke-induced emphysema.
Chen ZH, Lam HC, Jin Y, Kim HP, Cao J, Lee SJ, Ifedigbo E, Parameswaran H, Ryter SW, Choi AM
Proc Natl Acad Sci U S A. 2010
PubMed ID: 20956295
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Autophagy is essential for mouse sense of balance.
Mariño G, Fernández AF, Cabrera S, Lundberg YW, Cabanillas R, Rodríguez F, Salvador-Montoliu N, Vega JA, Germanà A, Fueyo A, Freije JM, López-Otín C
J Clin Invest. 2010
PubMed ID: 20577052
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Network organization of the human autophagy system.
Behrends C, Sowa ME, Gygi SP, Harper JW
Nature. 2010
PubMed ID: 20562859
-
Cdx2 regulates endo-lysosomal function and epithelial cell polarity.
Gao N, Kaestner KH
Genes Dev. 2010
PubMed ID: 20551175
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FYCO1 is a Rab7 effector that binds to LC3 and PI3P to mediate microtubule plus end-directed vesicle transport.
Pankiv S, Alemu EA, Brech A, Bruun JA, Lamark T, Overvatn A, Bjørkøy G, Johansen T
J Cell Biol. 2010
PubMed ID: 20100911
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The unfolded protein response protects human tumor cells during hypoxia through regulation of the autophagy genes MAP1LC3B and ATG5.
Rouschop KM, van den Beucken T, Dubois L, Niessen H, Bussink J, Savelkouls K, Keulers T, Mujcic H, Landuyt W, Voncken JW, Lambin P, van der Kogel AJ, Koritzinsky M, Wouters BG
J Clin Invest. 2010
PubMed ID: 20038797
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Autophagic compartments gain access to the MHC class II compartments in thymic epithelium.
Kasai M, Tanida I, Ueno T, Kominami E, Seki S, Ikeda T, Mizuochi T
J Immunol. 2009
PubMed ID: 19915056
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The structure of Atg4B-LC3 complex reveals the mechanism of LC3 processing and delipidation during autophagy.
Satoo K, Noda NN, Kumeta H, Fujioka Y, Mizushima N, Ohsumi Y, Inagaki F
EMBO J. 2009
PubMed ID: 19322194
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Multiple mechanisms of germ cell loss in the perinatal mouse ovary.
Rodrigues P, Limback D, McGinnis LK, Plancha CE, Albertini DF
Reproduction. 2009
PubMed ID: 19176312
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A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Kirkin V, Lamark T, Sou YS, Bjørkøy G, Nunn JL, Bruun JA, Shvets E, McEwan DG, Clausen TH, Wild P, Bilusic I, Theurillat JP, Øvervatn A, Ishii T, Elazar Z, Komatsu M, Dikic I, Johansen T
Mol Cell. 2009
PubMed ID: 19250911
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Immunohistochemical expression of MAP1LC3A and MAP1LC3B protein in breast carcinoma tissues.
Othman EQ, Kaur G, Mutee AF, Muhammad TS, Tan ML
J Clin Lab Anal. 2009
PubMed ID: 19623642
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Structural basis for sorting mechanism of p62 in selective autophagy.
Ichimura Y, Kumanomidou T, Sou YS, Mizushima T, Ezaki J, Ueno T, Kominami E, Yamane T, Tanaka K, Komatsu M
J Biol Chem. 2008
PubMed ID: 18524774
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[Expression of autophagy-related genes Beclin1 and MAPLC3 in non-small cell lung cancer]
Liu Q, Wang JJ, Pan YC, Meng LF, Zhan X, Zheng QF
Ai Zheng. 2008
PubMed ID: 18184459
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Developmental expression of LC3alpha and beta: absence of fibronectin or autophagy phenotype in LC3beta knockout mice.
Cann GM, Guignabert C, Ying L, Deshpande N, Bekker JM, Wang L, Zhou B, Rabinovitch M
Dev Dyn. 2008
PubMed ID: 18069693
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Toll-like receptor signalling in macrophages links the autophagy pathway to phagocytosis.
Sanjuan MA, Dillon CP, Tait SW, Moshiach S, Dorsey F, Connell S, Komatsu M, Tanaka K, Cleveland JL, Withoff S, Green DR
Nature. 2007
PubMed ID: 18097414
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Homeostatic levels of p62 control cytoplasmic inclusion body formation in autophagy-deficient mice.
Komatsu M, Waguri S, Koike M, Sou YS, Ueno T, Hara T, Mizushima N, Iwata J, Ezaki J, Murata S, Hamazaki J, Nishito Y, Iemura S, Natsume T, Yanagawa T, Uwayama J, Warabi E, Yoshida H, Ishii T, Kobayashi A, Yamamoto M, Yue Z, Uchiyama Y, Kominami E, Tanaka K
Cell. 2007
PubMed ID: 18083104
-
Ambra1 regulates autophagy and development of the nervous system.
Fimia GM, Stoykova A, Romagnoli A, Giunta L, Di Bartolomeo S, Nardacci R, Corazzari M, Fuoco C, Ucar A, Schwartz P, Gruss P, Piacentini M, Chowdhury K, Cecconi F
Nature. 2007
PubMed ID: 17589504
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Essential role of RGS-PX1/sorting nexin 13 in mouse development and regulation of endocytosis dynamics.
Zheng B, Tang T, Tang N, Kudlicka K, Ohtsubo K, Ma P, Marth JD, Farquhar MG, Lehtonen E
Proc Natl Acad Sci U S A. 2006
PubMed ID: 17077144
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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Magdaleno S, Jensen P, Brumwell CL, Seal A, Lehman K, Asbury A, Cheung T, Cornelius T, Batten DM, Eden C, Norland SM, Rice DS, Dosooye N, Shakya S, Mehta P, Curran T
PLoS Biol. 2006
PubMed ID: 16602821
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Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP, and GATE-16.
Sou YS, Tanida I, Komatsu M, Ueno T, Kominami E
J Biol Chem. 2006
PubMed ID: 16303767
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Molecular cloning and characterization of rat LC3A and LC3B--two novel markers of autophagosome.
Wu J, Dang Y, Su W, Liu C, Ma H, Shan Y, Pei Y, Wan B, Guo J, Yu L
Biochem Biophys Res Commun. 2006
PubMed ID: 16300744
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The LIFEdb database in 2006.
Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, Bechtel S, Simpson J, Hofmann O, Hide W, Glatting KH, Huber W, Pepperkok R, Poustka A, Wiemann S
Nucleic Acids Res. 2006
PubMed ID: 16381901
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Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.
Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S
Genome Res. 2006
PubMed ID: 16344560
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Towards a proteome-scale map of the human protein-protein interaction network.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M
Nature. 2005
PubMed ID: 16189514
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A human protein-protein interaction network: a resource for annotating the proteome.
Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, Stroedicke M, Zenkner M, Schoenherr A, Koeppen S, Timm J, Mintzlaff S, Abraham C, Bock N, Kietzmann S, Goedde A, Toksöz E, Droege A, Krobitsch S, Korn B, Birchmeier W, Lehrach H, Wanker EE
Cell. 2005
PubMed ID: 16169070
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Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
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The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
-
Solution structure of microtubule-associated protein light chain 3 and identification of its functional subdomains.
Kouno T, Mizuguchi M, Tanida I, Ueno T, Kanematsu T, Mori Y, Shinoda H, Hirata M, Kominami E, Kawano K
J Biol Chem. 2005
PubMed ID: 15857831
-
The sequence and analysis of duplication-rich human chromosome 16.
Martin J, Han C, Gordon LA, Terry A, Prabhakar S, She X, Xie G, Hellsten U, Chan YM, Altherr M, Couronne O, Aerts A, Bajorek E, Black S, Blumer H, Branscomb E, Brown NC, Bruno WJ, Buckingham JM, Callen DF, Campbell CS, Campbell ML, Campbell EW, Caoile C, Challacombe JF, Chasteen LA, Chertkov O, Chi HC, Christensen M, Clark LM, Cohn JD, Denys M, Detter JC, Dickson M, Dimitrijevic-Bussod M, Escobar J, Fawcett JJ, Flowers D, Fotopulos D, Glavina T, Gomez M, Gonzales E, Goodstein D, Goodwin LA, Grady DL, Grigoriev I, Groza M, Hammon N, Hawkins T, Haydu L, Hildebrand CE, Huang W, Israni S, Jett J, Jewett PB, Kadner K, Kimball H, Kobayashi A, Krawczyk MC, Leyba T, Longmire JL, Lopez F, Lou Y, Lowry S, Ludeman T, Manohar CF, Mark GA, McMurray KL, Meincke LJ, Morgan J, Moyzis RK, Mundt MO, Munk AC, Nandkeshwar RD, Pitluck S, Pollard M, Predki P, Parson-Quintana B, Ramirez L, Rash S, Retterer J, Ricke DO, Robinson DL, Rodriguez A, Salamov A, Saunders EH, Scott D, Shough T, Stallings RL, Stalvey M, Sutherland RD, Tapia R, Tesmer JG, Thayer N, Thompson LS, Tice H, Torney DC, Tran-Gyamfi M, Tsai M, Ulanovsky LE, Ustaszewska A, Vo N, White PS, Williams AL, Wills PL, Wu JR, Wu K, Yang J, Dejong P, Bruce D, Doggett NA, Deaven L, Schmutz J, Grimwood J, Richardson P, Rokhsar DS, Eichler EE, Gilna P, Lucas SM, Myers RM, Rubin EM, Pennacchio LA
Nature. 2004
PubMed ID: 15616553
-
Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas.
Watahiki A, Waki K, Hayatsu N, Shiraki T, Kondo S, Nakamura M, Sasaki D, Arakawa T, Kawai J, Harbers M, Hayashizaki Y, Carninci P
Nat Methods. 2004
PubMed ID: 15782199
-
LC3 conjugation system in mammalian autophagy.
Tanida I, Ueno T, Kominami E
Int J Biochem Cell Biol. 2004
PubMed ID: 15325588
-
Human light chain 3/MAP1LC3B is cleaved at its carboxyl-terminal Met121 to expose Gly120 for lipidation and targeting to autophagosomal membranes.
Tanida I, Ueno T, Kominami E
J Biol Chem. 2004
PubMed ID: 15355958
-
From ORFeome to biology: a functional genomics pipeline.
Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, Bechtel S, Sauermann M, Korf U, Pepperkok R, Sültmann H, Poustka A
Genome Res. 2004
PubMed ID: 15489336
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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Morrin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J, MGC Project Team
Genome Res. 2004
PubMed ID: 15489334
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HsAtg4B/HsApg4B/autophagin-1 cleaves the carboxyl termini of three human Atg8 homologues and delipidates microtubule-associated protein light chain 3- and GABAA receptor-associated protein-phospholipid conjugates.
Tanida I, Sou YS, Ezaki J, Minematsu-Ikeguchi N, Ueno T, Kominami E
J Biol Chem. 2004
PubMed ID: 15187094
-
The crystal structure of microtubule-associated protein light chain 3, a mammalian homologue of Saccharomyces cerevisiae Atg8.
Sugawara K, Suzuki NN, Fujioka Y, Mizushima N, Ohsumi Y, Inagaki F
Genes Cells. 2004
PubMed ID: 15265004
-
A protein interaction framework for human mRNA degradation.
Lehner B, Sanderson CM
Genome Res. 2004
PubMed ID: 15231747
-
LC3, GABARAP and GATE16 localize to autophagosomal membrane depending on form-II formation.
Kabeya Y, Mizushima N, Yamamoto A, Oshitani-Okamoto S, Ohsumi Y, Yoshimori T
J Cell Sci. 2004
PubMed ID: 15169837
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
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Nature. 2004
PubMed ID: 15057822
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Caldendrin but not calmodulin binds to light chain 3 of MAP1A/B: an association with the microtubule cytoskeleton highlighting exclusive binding partners for neuronal Ca(2+)-sensor proteins.
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J Mol Biol. 2004
PubMed ID: 15095872
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Proteomic identification of brain proteins that interact with dynein light chain LC8.
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Proteomics. 2004
PubMed ID: 14760703
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Complete sequencing and characterization of 21,243 full-length human cDNAs.
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Nat Genet. 2004
PubMed ID: 14702039
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The gene expression profiling of sporadic pheochromocytoma and novel full-length cDNAs cloning.
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Endocr Relat Cancer. 2003
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Eur J Cancer. 2003
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Post-translational modifications of three members of the human MAP1LC3 family and detection of a novel type of modification for MAP1LC3B.
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A functional activating protein 1 (AP-1) site regulates matrix metalloproteinase 2 (MMP-2) transcription by cardiac cells through interactions with JunB-Fra1 and JunB-FosB heterodimers.
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Biochem J. 2003
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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
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PubMed ID: 12477932
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
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Nature. 2002
PubMed ID: 12466851
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J Biol Chem. 2002
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Science. 2001
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Nature. 2001
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