SLC39A7

  Summary from T1DBase   Top   Help
Gene Description:   solute carrier family 39 (zinc transporter), member 7
Synonyms:   AA408174, ZIP7, KE4, MGC143814, Rt1Ke4, D6S115E, AI117660, Ke-4, Ke4, H2-Ke4, RT1-Ke4, Zip7, RING5, H-2Ke4, HKE4, Slc39a7, MGC143815, D6S2244E, AL024048, MGC94153, Ring5, H2-KE4, SLC39A7
Orthologs:   Human SLC39A7 (protein-coding), Mouse Slc39a7 (protein-coding), Rat Slc39a7 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
MHC Human chr6:29910021..33498585 3.59 688
expander Linkage Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr6:33168222..33172216 (3.99 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr17:34164148..34168635 (4.49 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr20:4961280..4964652 (3.37 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Moderate Moderate High Moderate Moderate Low Low Low HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for SLC39A7:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
KEGG Network: None available
Biocarta: None available
expander Reactome: 6
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 8
  Publications   Top   Help
expander Publications: 60
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:95909 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 7922 14977 294281
EnsEMBL Gene(s) ENSG00000112473 ENSG00000206288 ENSG00000224399 ENSG00000226614 ENSG00000227402 ENSG00000229802 ENSMUSG00000024327 ENSRNOG00000000465
Unigene Hs.631995 Mm.18556 Rn.103977
Homologene SLC39A7 Slc39a7 Slc39a7
OMIM 601416 N/A N/A
GeneCards SLC39A7 N/A N/A
Beta Cell Genomics DT.100811035 DT.121346998 DT.211216 DT.86852803 DT.101386869 DT.493905 DT.533004 DT.94201353 N/A
Reactome Q92504 N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:95909 N/A
WikiGenes 7922 14977 294281
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
View this page in archive site