LOC728543
| Gene Description: |
hypothetical protein LOC728543 |
| Synonyms: |
LOC728543 |
| Orthologs: |
Human LOC728543 (unknown)
|
| |
|
Sources
Sources
|
Possible sources:
|
HomoloGene, MGD, RGD, Ensembl, Inparanoid, OrthoMCL, KEGG
|
|
|
|
Gene Overview from T1DBase
Top
Help
Beta Cell Gene Atlas from T1DBase
Top
Help
| Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
|
| |
|
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
no data |
|
|
Expression Legend
|
|
|
|
The Beta Cell Gene Atlas is a collection of almost all available public microarray
data generated with pancreatic beta cells and related cell lines and types. The
expression data comes from 131 array analyses derived from 28 experiments
(open details in a new window).
The basal (untreated cell) expression signal intensity values in each array
were converted to ranks within the experiments; the highest value was used for
genes represented by more than one probe. The rank values of genes in a given cell
type were averaged with other calculated values from experiments performed with the
same cell type. The rank transformation of the expression values enable comparison
of gene expression across different organisms and tissues.
|
|
A red border around a cell indicates greater certainty in the data;
specifically, the gene has >0.95 probability of being expressed in the tissue.
|
|
| We do not have tissue expression data for this gene. |
No HaemAtlas Expression pattern available for this gene.
Cross-Reference to Pathways and GO Terms
Top
Help
|
|
KEGG Network: None available
|
| |
|
|
|
|
Biocarta: None available
|
| |
|
|
|
|
Reactome: None available
|
| |
|
|
|
|
NCI-Nature Pathway Interaction Database: None available
|
| |
|
|
|
|
Gene Ontology: None available
|
| |
|
|
|
|
|
KEGG Network: None available
|
|
|
|
|
|
|
|
|
|
|
NCI-Nature Pathway Interaction Database: None available
|
|
|
|
|
Gene Ontology: None available
|
|
Type 1 Diabetes Publications: 1
-
Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.
Todd JA, Walker NM, Cooper JD, Smyth DJ, Downes K, Plagnol V, Bailey R, Nejentsev S, Field SF, Payne F, Lowe CE, Szeszko JS, Hafler JP, Zeitels L, Yang JH, Vella A, Nutland S, Stevens HE, Schuilenburg H, Coleman G, Maisuria M, Meadows W, Smink LJ, Healy B, Burren OS, Lam AA, Ovington NR, Allen J, Adlem E, Leung HT, Wallace C, Howson JM, Guja C, Ionescu-Tîrgovişte C, Genetics of Type 1 Diabetes in Finland, Simmonds MJ, Heward JM, Gough SC, Wellcome Trust Case Control Consortium, Dunger DB, Wicker LS, Clayton DG
Nat Genet. 2007
PubMed ID: 17554260
Publications: 2
-
Complete sequencing and characterization of 21,243 full-length human cDNAs.
Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S
Nat Genet. 2004
PubMed ID: 14702039
-
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA, Mammalian Gene Collection Program Team
Proc Natl Acad Sci U S A. 2002
PubMed ID: 12477932
Model Organism Phenotype Links
Top
Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
No mouse phenotype links available for this gene.
|
|
Human
|
Mouse
|
Rat
|
|
Entrez Gene
|
728543
|
N/A
|
N/A
|
|
EnsEMBL Gene(s)
|
N/A
|
N/A
|
N/A
|
|
Unigene
|
Hs.506815
|
N/A
|
N/A
|
|
Homologene
|
LOC728543
|
N/A
|
N/A
|
|
OMIM
|
N/A
|
N/A
|
N/A
|
|
GeneCards
|
LOC728543
|
N/A
|
N/A
|
|
Beta Cell Genomics
|
DT.91979887
|
N/A
|
N/A
|
|
Reactome
|
N/A
|
N/A
|
N/A
|
|
Plasma Peptide Atlas
|
N/A
|
N/A
|
N/A
|
|
MGI
|
N/A
|
N/A
|
N/A
|
|
WikiGenes
|
728543
|
N/A
|
N/A
|
|
External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network
Top
Help
Relevant resources:
Home