TDGF1

  Summary from T1DBase   Top   Help
Gene Description:   teratocarcinoma-derived growth factor 1
Synonyms:   CRIPTO, CRGF, TDGF1, CR1, CR, cripto, Tdgf1
Orthologs:   Human TDGF1 (protein-coding), Mouse Tdgf1 (protein-coding), Rat Tdgf1 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1 Rat: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
3p21.31 Human chr3:45980673..46654132 0.67 77 rs333 rs11711054
expander Other Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr3:46616045..46623953 (7.91 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr9:110842112..110848662 (6.55 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr8:115341587..115346871 (5.28 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
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expander Expression Legend
  Tissue Expression   Top   Help
We do not have tissue expression data for this gene.
  HaemAtlas Expression   Top   Help

No HaemAtlas Expression pattern available for this gene.
  Interactions from T1DBase   Top   Help
expander Interactions Table for TDGF1:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
KEGG Network: None available
Biocarta: None available
Reactome: None available
expander NCI-Nature Pathway Interaction Database: 1
expander Gene Ontology: 21
  Publications   Top   Help
expander Type 1 Diabetes Publications: 1
expander Publications: 161
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:98658 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 6997 21667 680246
EnsEMBL Gene(s) ENSG00000241186 ENSMUSG00000032494 ENSRNOG00000037171
Unigene Hs.385870 Mm.5090 N/A
Homologene TDGF1 Tdgf1 Tdgf1
OMIM 187395 N/A N/A
GeneCards TDGF1 N/A N/A
Beta Cell Genomics DT.100725583 DT.110570999 DT.530602 N/A
Reactome N/A N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:98658 N/A
WikiGenes 6997 21667 680246
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
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