STAT4

  Summary from T1DBase   Top   Help
Gene Description:   signal transducer and activator of transcription 4
Synonyms:   SLEB11, STAT4, Stat4
Orthologs:   Human STAT4 (protein-coding), Mouse Stat4 (protein-coding), Rat Stat4 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1 Rat: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
2q32.2 Human chr2:191888224..192030553 0.14 6 rs6752770
expander Other Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr2:191894302..192016316 (1221 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr1:52043992..52164032 (1204 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr9:46455636..46650076 (194.44 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
no data
 
no data
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Not Detected Low Not Detected Not Detected Not Detected High High High HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for STAT4:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
expander KEGG Network: 1
expander Biocarta: 2
Reactome: None available
expander NCI-Nature Pathway Interaction Database: 5
expander Gene Ontology: 13
  Publications   Top   Help
expander Type 1 Diabetes Publications: 11
expander Publications: 327
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:103062 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 6775 20849 367264
EnsEMBL Gene(s) ENSG00000138378 ENSMUSG00000062939 ENSRNOG00000014079
Unigene Hs.80642 Mm.1550 Rn.137580
Homologene STAT4 Stat4 Stat4
OMIM 600558 N/A N/A
GeneCards STAT4 N/A N/A
Beta Cell Genomics DT.101962272 DT.120978346 DT.210252 DT.40117013 DT.110921457 DT.50315592 DT.91558281 N/A
Reactome N/A N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:103062 N/A
WikiGenes 6775 20849 367264
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
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