RXRB

  Summary from T1DBase   Top   Help
Gene Description:   retinoid X receptor, beta; retinoid X receptor beta
Synonyms:   Nr2b2, NR2B2, AL023085, MGC1831, RXR-beta, H-2RIIBP, RCoR-1, Rub, DAUDI6, Rxrb, RXRB
Orthologs:   Human RXRB (protein-coding), Mouse Rxrb (protein-coding), Rat Rxrb (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
MHC Human chr6:29910021..33498585 3.59 688
expander Linkage Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr6:33161365..33168630 (7.26 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr17:34168757..34175344 (6.59 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr20:4954336..4960880 (6.54 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Moderate Moderate High Moderate Moderate Moderate Moderate Moderate HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for RXRB:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
expander KEGG Network: 6
Biocarta: None available
expander Reactome: 3
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 27
  Publications   Top   Help
expander Type 1 Diabetes Publications: 3
expander Publications: 180
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:98215 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 6257 20182 361801
EnsEMBL Gene(s) ENSG00000204231 ENSG00000206289 ENSG00000227322 ENSG00000228333 ENSG00000231321 ENSG00000235712 ENSMUSG00000039656 ENSRNOG00000000464
Unigene Hs.388034 Mm.1243 Rn.49295
Homologene RXRB Rxrb Rxrb
OMIM 180246 N/A N/A
GeneCards RXRB N/A N/A
Beta Cell Genomics DT.100811035 DT.118619 DT.118621 DT.91841173 DT.101372530 DT.533004 DT.55169865 N/A
Reactome P28702 N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:98215 N/A
WikiGenes 6257 20182 361801
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
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