PSMD11

Summary Top Help

Gene Description:

proteasome (prosome, macropain) 26S subunit, non-ATPase, 11

Synonyms:

S9, C78232, p44.5, PSMD11, 1810019E17Rik, Rpn6, 1700089D09Rik, 2610024G20Rik, P44.5, Psmd11, 2810055C24Rik

Orthologs:

Human PSMD11 (protein-coding), Mouse Psmd11 (protein-coding), Rat Psmd11 (protein-coding)

Sources

Gene Overview from Genome Browser Top Help

(Human) GRCh37 - chr17:30771502..30809398 (37.90 kb) View in Genome Browser

(Mouse) NCBIM37 - chr11:80242117..80286750 (44.63 kb) View in Genome Browser

(Rat) RGSC3.4 - chr10:68664950..68710616 (45.67 kb) View in Genome Browser

HaemAtlas Expression from HaemAtlas Top Help

HaemAtlas Expression Table for PSMD11:

Beta Cell Expression from Beta Cell Gene Atlas Top Help

Cell Types Showing Expression: Available

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.

Human					Mouse			Rat
ductal cells	exocrine pancreas	pancreatic islets	primary beta cells	Pancreatic Islets MPSS	beta cell line	pancreatic islets	whole pancreas	alpha cell	beta cell line	pancreatic islets	primary beta cells	whole pancreas

Expression Legend

Tissue Expression from GNF Gene Atlas Top Help

Tissues Showing Expression: Available

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.

Expression Legend

Interactions Top Help

Interactions Table for PSMD11:

The PSMD11 interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.

The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.

Interactor	Interactor	Sources	Classification	Pubmed IDs
PSMD11	HDAC5	BioGRID	empirical	21081666
PSMD11	PSME3	Reactome	predicted
PSMD11	PSMD14	IntAct, BioGRID, Reactome, Sanger Interaction Map	empirical	19615732 15345047
PSMD11	USP20	IntAct, BioGRID	empirical	19615732
PSMD11	COPS6	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	ZHX1	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	LRRK2	IntAct	empirical	21983832
PSMD11	PSMB11	Reactome	predicted
PSMD11	CRMP1	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	PSMA8	Reactome	predicted
PSMD11	EEF1A1	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	EEF1G	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	PSME4	Reactome	predicted
PSMD11	RPGRIP1L	IntAct	empirical	21565611
PSMD11	KIAA0368	Sanger Interaction Map	predicted	15345047
PSMD11	GAPDH	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	GDF9	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	BRD7	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	KCNMA1	IntAct	empirical	19423573
PSMD11	SMAD1	HPRD, MINT	empirical	15231748
PSMD11	SMAD2	HPRD, MINT	empirical	15231748
PSMD11	SMAD3	HPRD, MINT	empirical	15231748
PSMD11	SMAD4	HPRD, MINT	empirical	15231748
PSMD11	SMAD5	HPRD, MINT	empirical	15231748
PSMD11	NFKB2	HPRD, MINT, BioGRID	empirical	12185077 14743216
PSMD11	MED31	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	COPS4	Sanger Interaction Map	predicted	15345047
PSMD11	INSIG2	BioGRID	empirical	19815544
PSMD11	UCHL5	IntAct, BioGRID	empirical	19490896 19615732 18922472
PSMD11	FAM190B	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	RIF1	IntAct	empirical	16169070
PSMD11	LRIF1	HPRD, MINT	empirical	16169070
PSMD11	PSMA1	Reactome	predicted
PSMD11	PSMA2	Reactome	predicted
PSMD11	PSMA3	Reactome	predicted
PSMD11	PSMA4	Reactome	predicted
PSMD11	PSMA5	Reactome	predicted
PSMD11	PSMA6	Reactome	predicted
PSMD11	PSMA7	Reactome	predicted
PSMD11	PSMB1	Reactome	predicted
PSMD11	PSMB2	Reactome	predicted
PSMD11	PSMB3	Reactome	predicted
PSMD11	PSMB4	Reactome	predicted
PSMD11	PSMB5	Reactome	predicted
PSMD11	PSMB6	Reactome	predicted
PSMD11	PSMB7	Reactome	predicted
PSMD11	PSMB8	Reactome	predicted
PSMD11	PSMB9	Reactome	predicted
PSMD11	PSMB10	Reactome	predicted
PSMD11	PSMC1	Reactome, Sanger Interaction Map	predicted	15345047
PSMD11	PSMC2	Reactome, Sanger Interaction Map	predicted	15345047
PSMD11	PSMC3	Reactome, Sanger Interaction Map	predicted	15345047
PSMD11	PSMC4	IntAct, BioGRID, Reactome, Sanger Interaction Map	empirical	17353931 15345047
PSMD11	PSMC5	IntAct, Reactome	empirical	19490896
PSMD11	PSMC6	Reactome, Sanger Interaction Map	predicted	15345047
PSMD11	PSMD1	Reactome	predicted
PSMD11	PSMD2	Reactome	predicted
PSMD11	PSMD3	Reactome	predicted
PSMD11	PSMD4	MINT, IntAct, Reactome, Sanger Interaction Map	empirical	16990800 16857966 15345047
PSMD11	PSMD5	Reactome	predicted
PSMD11	PSMD7	IntAct, Reactome, Sanger Interaction Map	empirical	19615732 15345047
PSMD11	PSMD8	Reactome, Sanger Interaction Map	predicted	15345047
PSMD11	PSMD9	Reactome	predicted
PSMD11	PSMD10	IntAct, BioGRID, Reactome, Sanger Interaction Map	empirical	17353931 19490896 15345047
PSMD11	PSMD12	Reactome	predicted
PSMD11	PSMD13	IntAct, Reactome, Sanger Interaction Map	empirical	17353931 15345047
PSMD11	PSME1	Reactome	predicted
PSMD11	PSME2	Reactome	predicted
PSMD11	PTN	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	PTPRK	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	CCDC90B	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	SUMO2	IntAct	empirical	16169070
PSMD11	TLE1	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	TP53	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	TRAF6	MINT, IntAct	empirical	14743216
PSMD11	TUBB2A	MINT, IntAct	empirical	16169070
PSMD11	UBC	BioGRID	empirical	16196087 22118674 21987572 12938929 21139048 21890473 21906983
PSMD11	ZBTB16	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	PAAF1	IntAct, BioGRID	empirical	17353931
PSMD11	RBM48	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	IGSF21	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	RUNX1T1	IntAct	empirical	17353931
PSMD11	HAP1	MINT, IntAct	empirical	16169070
PSMD11	UNC119	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	USP14	IntAct, BioGRID	empirical	19615732
PSMD11	PSMF1	Reactome	predicted
PSMD11	PSMD6	IntAct, BioGRID, Reactome, Sanger Interaction Map	empirical	17353931 15345047
PSMD11	SETDB1	HPRD, MINT, IntAct, BioGRID	empirical	16169070
PSMD11	GFPT2	Sanger Interaction Map	predicted	15345047
PSMD11	USP15	IntAct, BioGRID	empirical	19615732

Cross-Reference to Pathways and GO Terms Top Help

View all

KEGG Network: 1

Biocarta: None available

Reactome: 47

Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins	REACT_6954
APC/C-mediated degradation of cell cycle proteins	REACT_6828
APC/C:Cdc20 mediated degradation of mitotic proteins	REACT_6781
APC/C:Cdc20 mediated degradation of Securin	REACT_6871
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1	REACT_6761
Apoptosis	REACT_578
Assembly of the pre-replicative complex	REACT_2243
Autodegradation of Cdh1 by Cdh1:APC/C	REACT_6785
Autodegradation of the E3 ubiquitin ligase COP1	REACT_20549
Cdc20:Phospho-APC/C mediated degradation of Cyclin A	REACT_6850
CDK-mediated phosphorylation and removal of Cdc6	REACT_1221
CDT1 association with the CDC6:ORC:origin complex	REACT_1949
Cell Cycle Checkpoints	REACT_1538
Cell Cycle, Mitotic	REACT_152
Cyclin A:Cdk2-associated events at S phase entry	REACT_9029
Cyclin E associated events during G1/S transition	REACT_1574
Degradation of beta-catenin by the destruction complex	REACT_11063
DNA Replication	REACT_383
DNA Replication Pre-Initiation	REACT_734
G1/S DNA Damage Checkpoints	REACT_2254
G1/S Transition	REACT_1783
M/G1 Transition	REACT_1725
Metabolism of amino acids and derivatives	REACT_13
Mitotic G1-G1/S phases	REACT_21267
Mitotic M-M/G1 phases	REACT_21300
Orc1 removal from chromatin	REACT_1156
p53-Dependent G1 DNA Damage Response	REACT_1625
p53-Dependent G1/S DNA damage checkpoint	REACT_85
p53-Independent DNA Damage Response	REACT_2160
p53-Independent G1/S DNA damage checkpoint	REACT_1208
Regulation of activated PAK-2p34 by proteasome mediated degradation	REACT_13464
Regulation of APC/C activators between G1/S and early anaphase	REACT_6837
Regulation of Apoptosis	REACT_13648
Regulation of DNA replication	REACT_829
Regulation of mitotic cell cycle	REACT_21279
Regulation of ornithine decarboxylase (ODC)	REACT_13565
Removal of licensing factors from origins	REACT_207
S Phase	REACT_899
SCF(Skp2)-mediated degradation of p27/p21	REACT_9003
SCF-beta-TrCP mediated degradation of Emi1	REACT_6821
Signaling by Wnt	REACT_11045
Stabilization of p53	REACT_309
Switching of origins to a post-replicative state	REACT_2148
Synthesis of DNA	REACT_2014
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A	REACT_1614
Ubiquitin-dependent degradation of Cyclin D	REACT_938
Ubiquitin-dependent degradation of Cyclin D1	REACT_4

NCI-Nature Pathway Interaction Database: None available

Gene Ontology: 26

KEGG Network: 1
Proteasome	Human - 3050	Mouse - 3050	Rat - 3050

Biocarta: None available

Reactome: 47
Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins	REACT_6954
APC/C-mediated degradation of cell cycle proteins	REACT_6828
APC/C:Cdc20 mediated degradation of mitotic proteins	REACT_6781
APC/C:Cdc20 mediated degradation of Securin	REACT_6871
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1	REACT_6761
Apoptosis	REACT_578
Assembly of the pre-replicative complex	REACT_2243
Autodegradation of Cdh1 by Cdh1:APC/C	REACT_6785
Autodegradation of the E3 ubiquitin ligase COP1	REACT_20549
Cdc20:Phospho-APC/C mediated degradation of Cyclin A	REACT_6850
CDK-mediated phosphorylation and removal of Cdc6	REACT_1221
CDT1 association with the CDC6:ORC:origin complex	REACT_1949
Cell Cycle Checkpoints	REACT_1538
Cell Cycle, Mitotic	REACT_152
Cyclin A:Cdk2-associated events at S phase entry	REACT_9029
Cyclin E associated events during G1/S transition	REACT_1574
Degradation of beta-catenin by the destruction complex	REACT_11063
DNA Replication	REACT_383
DNA Replication Pre-Initiation	REACT_734
G1/S DNA Damage Checkpoints	REACT_2254
G1/S Transition	REACT_1783
M/G1 Transition	REACT_1725
Metabolism of amino acids and derivatives	REACT_13
Mitotic G1-G1/S phases	REACT_21267
Mitotic M-M/G1 phases	REACT_21300
Orc1 removal from chromatin	REACT_1156
p53-Dependent G1 DNA Damage Response	REACT_1625
p53-Dependent G1/S DNA damage checkpoint	REACT_85
p53-Independent DNA Damage Response	REACT_2160
p53-Independent G1/S DNA damage checkpoint	REACT_1208
Regulation of activated PAK-2p34 by proteasome mediated degradation	REACT_13464
Regulation of APC/C activators between G1/S and early anaphase	REACT_6837
Regulation of Apoptosis	REACT_13648
Regulation of DNA replication	REACT_829
Regulation of mitotic cell cycle	REACT_21279
Regulation of ornithine decarboxylase (ODC)	REACT_13565
Removal of licensing factors from origins	REACT_207
S Phase	REACT_899
SCF(Skp2)-mediated degradation of p27/p21	REACT_9003
SCF-beta-TrCP mediated degradation of Emi1	REACT_6821
Signaling by Wnt	REACT_11045
Stabilization of p53	REACT_309
Switching of origins to a post-replicative state	REACT_2148
Synthesis of DNA	REACT_2014
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A	REACT_1614
Ubiquitin-dependent degradation of Cyclin D	REACT_938
Ubiquitin-dependent degradation of Cyclin D1	REACT_4

NCI-Nature Pathway Interaction Database: None available

Gene Ontology: 26
Cell cycle checkpoint	GO:0000075
G1/S transition of mitotic cell cycle	GO:0000082
S phase of mitotic cell cycle	GO:0000084
Protein polyubiquitination	GO:0000209
M/G1 transition of mitotic cell cycle	GO:0000216
Mitotic cell cycle	GO:0000278
Proteasome complex	GO:0000502
Antigen processing and presentation of peptide antigen via MHC class I	GO:0002474
Antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent	GO:0002479
Nucleoplasm	GO:0005654
Cytosol	GO:0005829
Regulation of cellular amino acid metabolic process	GO:0006521
Apoptotic process	GO:0006915
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest	GO:0006977
Gene expression	GO:0010467
Viral reproduction	GO:0016032
RNA metabolic process	GO:0016070
MRNA metabolic process	GO:0016071
Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process	GO:0031145
Cellular nitrogen compound metabolic process	GO:0034641
Antigen processing and presentation of exogenous peptide antigen via MHC class I	GO:0042590
Regulation of apoptotic process	GO:0042981
Small molecule metabolic process	GO:0044281
Negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	GO:0051436
Positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	GO:0051437
Regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	GO:0051439

Publications from PubMed Top Help

Publications: 82

Ubiquitin ligase substrate identification through quantitative proteomics at both the protein and peptide levels.
Lee KA, Hammerle LP, Andrews PS, Stokes MP, Mustelin T, Silva JC, Black RA, Doedens JR
J Biol Chem. 2011
PubMed ID: 21987572
Activity-based chemical proteomics accelerates inhibitor development for deubiquitylating enzymes.
Altun M, Kramer HB, Willems LI, McDermott JL, Leach CA, Goldenberg SJ, Kumar KG, Konietzny R, Fischer R, Kogan E, Mackeen MM, McGouran J, Khoronenkova SV, Parsons JL, Dianov GL, Nicholson B, Kessler BM
Chem Biol. 2011
PubMed ID: 22118674
Nuclear import of histone deacetylase 5 by requisite nuclear localization signal phosphorylation.
Greco TM, Yu F, Guise AJ, Cristea IM
Mol Cell Proteomics. 2011
PubMed ID: 21081666
Initial characterization of the human central proteome.
Burkard TR, Planyavsky M, Kaupe I, Breitwieser FP, Bürckstümmer T, Bennett KL, Superti-Furga G, Colinge J
BMC Syst Biol. 2011
PubMed ID: 21269460
PAC1 gene knockout reveals an essential role of chaperone-mediated 20S proteasome biogenesis and latent 20S proteasomes in cellular homeostasis.
Sasaki K, Hamazaki J, Koike M, Hirano Y, Komatsu M, Uchiyama Y, Tanaka K, Murata S
Mol Cell Biol. 2010
PubMed ID: 20498273
Regulated endoplasmic reticulum-associated degradation of a polytopic protein: p97 recruits proteasomes to Insig-1 before extraction from membranes.
Ikeda Y, Demartino GN, Brown MS, Lee JN, Goldstein JL, Ye J
J Biol Chem. 2009
PubMed ID: 19815544
Two-hybrid analysis identifies PSMD11, a non-ATPase subunit of the proteasome, as a novel interaction partner of AMP-activated protein kinase.
Moreno D, Viana R, Sanz P
Int J Biochem Cell Biol. 2009
PubMed ID: 19616115
Lysine acetylation targets protein complexes and co-regulates major cellular functions.
Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M
Science. 2009
PubMed ID: 19608861
Defining the human deubiquitinating enzyme interaction landscape.
Sowa ME, Bennett EJ, Gygi SP, Harper JW
Cell. 2009
PubMed ID: 19615732
Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair.
Svendsen JM, Smogorzewska A, Sowa ME, O'Connell BC, Gygi SP, Elledge SJ, Harper JW
Cell. 2009
PubMed ID: 19596235
Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.
Gauci S, Helbig AO, Slijper M, Krijgsveld J, Heck AJ, Mohammed S
Anal Chem. 2009
PubMed ID: 19413330
Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP, Mouse Genome Sequencing Consortium
PLoS Biol. 2009
PubMed ID: 19468303
Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions.
Mayya V, Lundgren DH, Hwang SI, Rezaul K, Wu L, Eng JK, Rodionov V, Han DK
Sci Signal. 2009
PubMed ID: 19690332
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ, Finnell RH, Sands AT, Zambrowicz BP, Abuin A
Genome Res. 2008
PubMed ID: 18799693
A quantitative atlas of mitotic phosphorylation.
Dephoure N, Zhou C, Villén J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP
Proc Natl Acad Sci U S A. 2008
PubMed ID: 18669648
EUCOMM--the European conditional mouse mutagenesis program.
Friedel RH, Seisenberger C, Kaloff C, Wurst W
Brief Funct Genomic Proteomic. 2007
PubMed ID: 17967808
Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.
Wang X, Chen CF, Baker PR, Chen PL, Kaiser P, Huang L
Biochemistry. 2007
PubMed ID: 17323924
Large-scale phosphorylation analysis of mouse liver.
Villén J, Beausoleil SA, Gerber SA, Gygi SP
Proc Natl Acad Sci U S A. 2007
PubMed ID: 17242355
Large-scale mapping of human protein-protein interactions by mass spectrometry.
Ewing RM, Chu P, Elisma F, Li H, Taylor P, Climie S, McBroom-Cerajewski L, Robinson MD, O'Connor L, Li M, Taylor R, Dharsee M, Ho Y, Heilbut A, Moore L, Zhang S, Ornatsky O, Bukhman YV, Ethier M, Sheng Y, Vasilescu J, Abu-Farha M, Lambert JP, Duewel HS, Stewart II, Kuehl B, Hogue K, Colwill K, Gladwish K, Muskat B, Kinach R, Adams SL, Moran MF, Morin GB, Topaloglou T, Figeys D
Mol Syst Biol. 2007
PubMed ID: 17353931
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M
Cell. 2006
PubMed ID: 17081983
Large-scale analysis of the human ubiquitin-related proteome.
Matsumoto M, Hatakeyama S, Oyamada K, Oda Y, Nishimura T, Nakayama KI
Proteomics. 2005
PubMed ID: 16196087
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II.
Baillat D, Hakimi MA, Näär AM, Shilatifard A, Cooch N, Shiekhattar R
Cell. 2005
PubMed ID: 16239144
A human protein-protein interaction network: a resource for annotating the proteome.
Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, Stroedicke M, Zenkner M, Schoenherr A, Koeppen S, Timm J, Mintzlaff S, Abraham C, Bock N, Kietzmann S, Goedde A, Toksöz E, Droege A, Krobitsch S, Korn B, Birchmeier W, Lehrach H, Wanker EE
Cell. 2005
PubMed ID: 16169070
Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette.
Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T, Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K, Araki K
Dev Growth Differ. 2005
PubMed ID: 15840001
Tagging genes with cassette-exchange sites.
Cobellis G, Nicolaus G, Iovino M, Romito A, Marra E, Barbarisi M, Sardiello M, Di Giorgio FP, Iovino N, Zollo M, Ballabio A, Cortese R
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Nat Methods. 2004
PubMed ID: 15782199
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
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Genome Res. 2004
PubMed ID: 15489334
Genomic analysis of mouse retinal development.
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PLoS Biol. 2004
PubMed ID: 15226823
Functional proteomics mapping of a human signaling pathway.
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Genome Res. 2004
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Mammalian Cdh1/Fzr mediates its own degradation.
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EMBO J. 2004
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
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PubMed ID: 14610273
The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G.
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Curr Biol. 2003
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Science. 2003
PubMed ID: 14564014
The enzymatic activity of CEM15/Apobec-3G is essential for the regulation of the infectivity of HIV-1 virion but not a sole determinant of its antiviral activity.
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J Biol Chem. 2003
PubMed ID: 12970355
The human immunodeficiency virus type 1 Vif protein reduces intracellular expression and inhibits packaging of APOBEC3G (CEM15), a cellular inhibitor of virus infectivity.
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J Virol. 2003
PubMed ID: 14557625
HIV-1 Vif protein binds the editing enzyme APOBEC3G and induces its degradation.
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Nat Med. 2003
PubMed ID: 14528301
The antiretroviral enzyme APOBEC3G is degraded by the proteasome in response to HIV-1 Vif.
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Nat Med. 2003
PubMed ID: 14528300
Human immunodeficiency virus-1 Tat protein interacts with distinct proteasomal alpha and beta subunits.
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PubMed ID: 14550573
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Mol Cell. 2003
PubMed ID: 14527406
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
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Virology. Weapons of mutational destruction.
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PubMed ID: 12920286
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PubMed ID: 12914693
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Good to CU.
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PubMed ID: 12840737
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Nature. 2003
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Nat Immunol. 2003
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DNA deamination mediates innate immunity to retroviral infection.
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PubMed ID: 12809610
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PubMed ID: 12750511
Comprehensive investigation of the molecular defect in vif-deficient human immunodeficiency virus type 1 virions.
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PubMed ID: 12719574
Exploring proteomes and analyzing protein processing by mass spectrometric identification of sorted N-terminal peptides.
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Nat Biotechnol. 2003
PubMed ID: 12665801
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells.
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PubMed ID: 12520002
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
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Proc Natl Acad Sci U S A. 2002
PubMed ID: 12477932
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Nature. 2002
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	Human	Mouse	Rat
Entrez Gene	5717	69077	303353
EnsEMBL Gene(s)	ENSG00000108671	ENSMUSG00000017428	ENSRNOG00000005538
Unigene	Hs.655396	Mm.260539	Rn.11861
Homologene	PSMD11	Psmd11	Psmd11
OMIM	604449	N/A	N/A
GeneCards	PSMD11	N/A	N/A
Beta Cell Genomics	DT.100058446 DT.101967701 DT.316347	DT.101339395 DT.102553111 DT.495677 DT.55221266 DT.94353278 DT.96085897 DT.97385169	N/A
Reactome	O00231	N/A	N/A
Plasma Peptide Atlas	N/A	N/A	N/A
WikiGenes	5717	69077	303353

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