LTF

  Summary from T1DBase   Top   Help
Gene Description:   lactotransferrin
Synonyms:   LTF, Ltf, HLF2, GIG12, Ms10r, Csp82, LF, MMS10R, Lf
Orthologs:   Human LTF (protein-coding), Mouse Ltf (protein-coding), Rat Ltf (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1 Rat: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
3p21.31 Human chr3:45980673..46654132 0.67 77 rs333 rs11711054
expander Other Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr3:46477136..46526724 (49.59 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr9:110921796..110945270 (23.47 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr8:115417764..115440609 (22.84 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
no data no data no data no data no data
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Not Detected Not Detected High Not Detected Not Detected Not Detected Not Detected Not Detected HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for LTF:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
KEGG Network: None available
expander Biocarta: 1
Reactome: None available
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 15
  Publications   Top   Help
expander Type 1 Diabetes Publications: 1
expander Publications: 222
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:96837 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 4057 17002 301034
EnsEMBL Gene(s) ENSG00000012223 ENSMUSG00000032496 ENSRNOG00000031779
Unigene Hs.529517 Mm.282359 Rn.218647
Homologene LTF Ltf Ltf
OMIM 150210 N/A N/A
GeneCards LTF N/A N/A
Beta Cell Genomics DT.120841139 DT.120841167 DT.120841194 DT.120841202 DT.120841210 DT.91779287 DT.95290797 DT.95290798 DT.95290880 DT.101363862 DT.91537153 DT.91576545 DT.94223474 DT.97395696 DT.98132215 N/A
Reactome N/A N/A N/A
Plasma Peptide Atlas ENSP00000231751 N/A N/A
MGI N/A MGI:96837 N/A
WikiGenes 4057 17002 301034
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
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