Home HOXB9
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(Human) GRCh37 - chr17:46698518..46703839 (5.32 kb) View in Genome Browser
(Mouse) NCBIM37 - chr11:96132644..96137909 (5.26 kb) View in Genome Browser
(Rat) RGSC3.4 - chr10:85002254..85005760 (3.51 kb) View in Genome Browser
HaemAtlas Expression Table for HOXB9:|
Expression Legend
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Cell Types Showing Expression: Available
Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
| Human | Mouse | Rat | ||||||||||
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| ductal cells | exocrine pancreas | pancreatic islets | primary beta cells | Pancreatic Islets MPSS | beta cell line | pancreatic islets | whole pancreas | alpha cell | beta cell line | pancreatic islets | primary beta cells | whole pancreas |
| no data | no data | no data | no data | no data | no data | |||||||
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The Beta Cell Gene Atlas is a collection of almost all available public microarray data generated with pancreatic beta cells and related cell lines and types. The expression data comes from 131 array analyses derived from 28 experiments (open details in a new window). The basal (untreated cell) expression signal intensity values in each array were converted to ranks within the experiments; the highest value was used for genes represented by more than one probe. The rank values of genes in a given cell type were averaged with other calculated values from experiments performed with the same cell type. The rank transformation of the expression values enable comparison of gene expression across different organisms and tissues.
A red border around a cell indicates greater certainty in the data; specifically, the gene has >0.95 probability of being expressed in the tissue.
Tissues Showing Expression: Available
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| Signal intensity values were converted to ranks within the experiments. For genes represented by more than one probeset, we averaged the intensity signals for each probeset across all tissues and chose the probeset with the highest average value. The rank transformation of the expression values enables comparison of gene expression across different organisms and tissues. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interactions Table for HOXB9:The HOXB9 interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.
The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.
| Interactor | Interactor | Sources | Classification | Pubmed IDs |
| HOXB9 | MYBBP1A | BioGRID | empirical | 20211142 |
| HOXB9 | PHTF1 | BioGRID | empirical | 20211142 |
| HOXB9 | RBPMS | HPRD, MINT, IntAct, BioGRID | empirical | 16189514 |
| HOXB9 | CREBBP | HPRD, BioGRID | empirical | 11585930 |
| HOXB9 | EP300 | HPRD | empirical | 11585930 |
| HOXB9 | MDFI | HPRD, MINT, IntAct, BioGRID | empirical | 16189514 19060904 |
| HOXB9 | ING4 | BioGRID | empirical | 20211142 |
| HOXB9 | SAT1 | HPRD, MINT, IntAct, BioGRID | empirical | 16189514 19060904 |
| HOXB9 | SOX15 | BioGRID | empirical | 20211142 |
| HOXB9 | TAL1 | IntAct | empirical | 21988832 |
| HOXB9 | BTG1 | HPRD, BioGRID | empirical | 10617598 |
| HOXB9 | UBC | BioGRID | empirical | 21139048 |
| HOXB9 | BTG2 | HPRD, BioGRID | empirical | 10617598 |
| HOXB9 | ZNF408 | BioGRID | empirical | 20211142 |
| HOXB9 | KRTAP4-12 | HPRD, MINT, IntAct, BioGRID | empirical | 16189514 |
| HOXB9 | SLX4 | IntAct | empirical | 19596235 |
| HOXB9 | HOPX | BioGRID | empirical | 20211142 |
| HOXB9 | SPZ1 | BioGRID | empirical | 20211142 |
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Type 1 Diabetes Publications: 1
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Differentiation of insulin-producing cells from human neural progenitor cells.
Hori Y, Gu X, Xie X, Kim SK
PLoS Med. 2005
PubMed ID: 15839736
Publications: 108
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HOX genes are expressed in bovine and mouse oocytes and early embryos.
Paul D, Bridoux L, Rezsöhazy R, Donnay I
Mol Reprod Dev. 2011
PubMed ID: 21567651
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Histone methylases MLL1 and MLL3 coordinate with estrogen receptors in estrogen-mediated HOXB9 expression.
Ansari KI, Shrestha B, Hussain I, Kasiri S, Mandal SS
Biochemistry. 2011
PubMed ID: 21428455
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Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.
Kondrashov N, Pusic A, Stumpf CR, Shimizu K, Hsieh AC, Xue S, Ishijima J, Shiroishi T, Barna M
Cell. 2011
PubMed ID: 21529712
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Axial Hox9 activity establishes the posterior field in the developing forelimb.
Xu B, Wellik DM
Proc Natl Acad Sci U S A. 2011
PubMed ID: 21383175
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The microRNA-processing enzyme Dicer is dispensable for somite segmentation but essential for limb bud positioning.
Zhang Z, O'Rourke JR, McManus MT, Lewandoski M, Harfe BD, Sun X
Dev Biol. 2011
PubMed ID: 21256124
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A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nürnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dollé P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS Biol. 2011
PubMed ID: 21267068
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Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.
Chung YC, Tsai YJ, Shiu TY, Sun YY, Wang PF, Chen CL
Gene Expr Patterns. 2011
PubMed ID: 20932939
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Global control of motor neuron topography mediated by the repressive actions of a single hox gene.
Jung H, Lacombe J, Mazzoni EO, Liem KF, Grinstein J, Mahony S, Mukhopadhyay D, Gifford DK, Young RA, Anderson KV, Wichterle H, Dasen JS
Neuron. 2010
PubMed ID: 20826310
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Mitochondrial retention of Opa1 is required for mouse embryogenesis.
Moore BA, Gonzalez Aviles GD, Larkins CE, Hillman MJ, Caspary T
Mamm Genome. 2010
PubMed ID: 20652258
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An atlas of combinatorial transcriptional regulation in mouse and man.
Ravasi T, Suzuki H, Cannistraci CV, Katayama S, Bajic VB, Tan K, Akalin A, Schmeier S, Kanamori-Katayama M, Bertin N, Carninci P, Daub CO, Forrest AR, Gough J, Grimmond S, Han JH, Hashimoto T, Hide W, Hofmann O, Kamburov A, Kaur M, Kawaji H, Kubosaki A, Lassmann T, van Nimwegen E, MacPherson CR, Ogawa C, Radovanovic A, Schwartz A, Teasdale RD, Tegnér J, Lenhard B, Teichmann SA, Arakawa T, Ninomiya N, Murakami K, Tagami M, Fukuda S, Imamura K, Kai C, Ishihara R, Kitazume Y, Kawai J, Hume DA, Ideker T, Hayashizaki Y
Cell. 2010
PubMed ID: 20211142
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Huntingtin facilitates polycomb repressive complex 2.
Seong IS, Woda JM, Song JJ, Lloret A, Abeyrathne PD, Woo CJ, Gregory G, Lee JM, Wheeler VC, Walz T, Kingston RE, Gusella JF, Conlon RA, Macdonald ME
Hum Mol Genet. 2010
PubMed ID: 19933700
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HOXB9, a gene overexpressed in breast cancer, promotes tumorigenicity and lung metastasis.
Hayashida T, Takahashi F, Chiba N, Brachtel E, Takahashi M, Godin-Heymann N, Gross KW, Vivanco MM, Wijendran V, Shioda T, Sgroi D, Donahoe PK, Maheswaran S
Proc Natl Acad Sci U S A. 2010
PubMed ID: 20080567
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Anterior visceral endoderm SMAD4 signaling specifies anterior embryonic patterning and head induction in mice.
Li C, Li YP, Fu XY, Deng CX
Int J Biol Sci. 2010
PubMed ID: 20941375
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Organogenesis relies on SoxC transcription factors for the survival of neural and mesenchymal progenitors.
Bhattaram P, Penzo-Méndez A, Sock E, Colmenares C, Kaneko KJ, Vassilev A, Depamphilis ML, Wegner M, Lefebvre V
Nat Commun. 2010
PubMed ID: 20596238
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Do HOXB9 and COL1A1 genes play a role in congenital dislocation of the hip? Study in a Caucasian population.
Rouault K, Scotet V, Autret S, Gaucher F, Dubrana F, Tanguy D, Yaacoub El Rassi C, Fenoll B, Férec C
Osteoarthritis Cartilage. 2009
PubMed ID: 19341834
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WNT/TCF signaling through LEF1 and HOXB9 mediates lung adenocarcinoma metastasis.
Nguyen DX, Chiang AC, Zhang XH, Kim JY, Kris MG, Ladanyi M, Gerald WL, Massagué J
Cell. 2009
PubMed ID: 19576624
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Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP, Mouse Genome Sequencing Consortium
PLoS Biol. 2009
PubMed ID: 19468303
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Early mouse caudal development relies on crosstalk between retinoic acid, Shh and Fgf signalling pathways.
Ribes V, Le Roux I, Rhinn M, Schuhbaur B, Dollé P
Development. 2009
PubMed ID: 19168680
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Quantification of Hox and surfactant protein-B transcription during murine lung development.
Grier DG, Thompson A, Lappin TR, Halliday HL
Neonatology. 2009
PubMed ID: 19204410
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An empirical framework for binary interactome mapping.
Venkatesan K, Rual JF, Vazquez A, Stelzl U, Lemmens I, Hirozane-Kishikawa T, Hao T, Zenkner M, Xin X, Goh KI, Yildirim MA, Simonis N, Heinzmann K, Gebreab F, Sahalie JM, Cevik S, Simon C, de Smet AS, Dann E, Smolyar A, Vinayagam A, Yu H, Szeto D, Borick H, Dricot A, Klitgord N, Murray RR, Lin C, Lalowski M, Timm J, Rau K, Boone C, Braun P, Cusick ME, Roth FP, Hill DE, Tavernier J, Wanker EE, Barabási AL, Vidal M
Nat Methods. 2009
PubMed ID: 19060904
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Rostral hindbrain patterning involves the direct activation of a Krox20 transcriptional enhancer by Hox/Pbx and Meis factors.
Wassef MA, Chomette D, Pouilhe M, Stedman A, Havis E, Desmarquet-Trin Dinh C, Schneider-Maunoury S, Gilardi-Hebenstreit P, Charnay P, Ghislain J
Development. 2008
PubMed ID: 18787068
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Minimization of exogenous signals in ES cell culture induces rostral hypothalamic differentiation.
Wataya T, Ando S, Muguruma K, Ikeda H, Watanabe K, Eiraku M, Kawada M, Takahashi J, Hashimoto N, Sasai Y
Proc Natl Acad Sci U S A. 2008
PubMed ID: 18697938
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Redundant roles of Tead1 and Tead2 in notochord development and the regulation of cell proliferation and survival.
Sawada A, Kiyonari H, Ukita K, Nishioka N, Imuta Y, Sasaki H
Mol Cell Biol. 2008
PubMed ID: 18332127
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Loss of Hoxb8 alters spinal dorsal laminae and sensory responses in mice.
Holstege JC, de Graaff W, Hossaini M, Cano SC, Jaarsma D, van den Akker E, Deschamps J
Proc Natl Acad Sci U S A. 2008
PubMed ID: 18430798
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GUDMAP: the genitourinary developmental molecular anatomy project.
McMahon AP, Aronow BJ, Davidson DR, Davies JA, Gaido KW, Grimmond S, Lessard JL, Little MH, Potter SS, Wilder EL, Zhang P, GUDMAP project
J Am Soc Nephrol. 2008
PubMed ID: 18287559
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Toward a confocal subcellular atlas of the human proteome.
Barbe L, Lundberg E, Oksvold P, Stenius A, Lewin E, Björling E, Asplund A, Pontén F, Brismar H, Uhlén M, Andersson-Svahn H
Mol Cell Proteomics. 2008
PubMed ID: 18029348
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Expression of the Ladybird-like homeobox 2 transcription factor in the developing mouse testis and epididymis.
Moisan V, Bomgardner D, Tremblay JJ
BMC Dev Biol. 2008
PubMed ID: 18304314
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Hox patterning of the vertebrate rib cage.
McIntyre DC, Rakshit S, Yallowitz AR, Loken L, Jeannotte L, Capecchi MR, Wellik DM
Development. 2007
PubMed ID: 17626057
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Adrenal development is initiated by Cited2 and Wt1 through modulation of Sf-1 dosage.
Val P, Martinez-Barbera JP, Swain A
Development. 2007
PubMed ID: 17537799
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Critical role of the p400/mDomino chromatin-remodeling ATPase in embryonic hematopoiesis.
Ueda T, Watanabe-Fukunaga R, Ogawa H, Fukuyama H, Higashi Y, Nagata S, Fukunaga R
Genes Cells. 2007
PubMed ID: 17535249
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Comprehensive analysis of homeobox genes in Hodgkin lymphoma cell lines identifies dysregulated expression of HOXB9 mediated via ERK5 signaling and BMI1.
Nagel S, Burek C, Venturini L, Scherr M, Quentmeier H, Meyer C, Rosenwald A, Drexler HG, MacLeod RA
Blood. 2007
PubMed ID: 17148583
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Fine mapping and candidate gene analyses of pulmonary adenoma resistance 1, a major genetic determinant of mouse lung adenoma resistance.
Wang M, Zhang Z, Zhang Z, Vikis H, Yan Y, Wang Y, You M
Cancer Res. 2007
PubMed ID: 17363568
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A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.
Choi MY, Romer AI, Hu M, Lepourcelet M, Mechoor A, Yesilaltay A, Krieger M, Gray PA, Shivdasani RA
Development. 2006
PubMed ID: 16971476
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DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
Zody MC, Garber M, Adams DJ, Sharpe T, Harrow J, Lupski JR, Nicholson C, Searle SM, Wilming L, Young SK, Abouelleil A, Allen NR, Bi W, Bloom T, Borowsky ML, Bugalter BE, Butler J, Chang JL, Chen CK, Cook A, Corum B, Cuomo CA, de Jong PJ, DeCaprio D, Dewar K, FitzGerald M, Gilbert J, Gibson R, Gnerre S, Goldstein S, Grafham DV, Grocock R, Hafez N, Hagopian DS, Hart E, Norman CH, Humphray S, Jaffe DB, Jones M, Kamal M, Khodiyar VK, LaButti K, Laird G, Lehoczky J, Liu X, Lokyitsang T, Loveland J, Lui A, Macdonald P, Major JE, Matthews L, Mauceli E, McCarroll SA, Mihalev AH, Mudge J, Nguyen C, Nicol R, O'Leary SB, Osoegawa K, Schwartz DC, Shaw-Smith C, Stankiewicz P, Steward C, Swarbreck D, Venkataraman V, Whittaker CA, Yang X, Zimmer AR, Bradley A, Hubbard T, Birren BW, Rogers J, Lander ES, Nusbaum C
Nature. 2006
PubMed ID: 16625196
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Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.
Kimura K, Wakamatsu A, Suzuki Y, Ota T, Nishikawa T, Yamashita R, Yamamoto J, Sekine M, Tsuritani K, Wakaguri H, Ishii S, Sugiyama T, Saito K, Isono Y, Irie R, Kushida N, Yoneyama T, Otsuka R, Kanda K, Yokoi T, Kondo H, Wagatsuma M, Murakawa K, Ishida S, Ishibashi T, Takahashi-Fujii A, Tanase T, Nagai K, Kikuchi H, Nakai K, Isogai T, Sugano S
Genome Res. 2006
PubMed ID: 16344560
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Towards a proteome-scale map of the human protein-protein interaction network.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M
Nature. 2005
PubMed ID: 16189514
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Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
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The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
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Developmental regulation of the Hox genes during axial morphogenesis in the mouse.
Deschamps J, van Nes J
Development. 2005
PubMed ID: 15944185
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Smad1 and Smad8 function similarly in mammalian central nervous system development.
Hester M, Thompson JC, Mills J, Liu Y, El-Hodiri HM, Weinstein M
Mol Cell Biol. 2005
PubMed ID: 15899870
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Nuclear re-organisation of the Hoxb complex during mouse embryonic development.
Chambeyron S, Da Silva NR, Lawson KA, Bickmore WA
Development. 2005
PubMed ID: 15829525
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Gene and alternative splicing annotation with AIR.
Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G
Genome Res. 2005
PubMed ID: 15632090
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Mouse brain organization revealed through direct genome-scale TF expression analysis.
Gray PA, Fu H, Luo P, Zhao Q, Yu J, Ferrari A, Tenzen T, Yuk DI, Tsung EF, Cai Z, Alberta JA, Cheng LP, Liu Y, Stenman JM, Valerius MT, Billings N, Kim HA, Greenberg ME, McMahon AP, Rowitch DH, Stiles CD, Ma Q
Science. 2004
PubMed ID: 15618518
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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Morrin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J, MGC Project Team
Genome Res. 2004
PubMed ID: 15489334
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
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Dev Dyn. 2004
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Dev Biol. 2003
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Proc Natl Acad Sci U S A. 2003
PubMed ID: 14610273
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Proc Natl Acad Sci U S A. 2003
PubMed ID: 14595010
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Quantitative trait loci for periosteal circumference (PC): identification of single loci and epistatic effects in F2 MRL/SJL mice.
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Bone. 2003
PubMed ID: 12753872
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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
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PubMed ID: 12477932
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
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Nature. 2002
PubMed ID: 12466851
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A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.
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Science. 2002
PubMed ID: 12040188
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Cdx1 and Cdx2 have overlapping functions in anteroposterior patterning and posterior axis elongation.
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Development. 2002
PubMed ID: 11959827
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Complete mutation analysis panel of the 39 human HOX genes.
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Teratology. 2002
PubMed ID: 11857506
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Hoxb8 is required for normal grooming behavior in mice.
Greer JM, Capecchi MR
Neuron. 2002
PubMed ID: 11779477
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The HOX homeodomain proteins block CBP histone acetyltransferase activity.
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Mol Cell Biol. 2001
PubMed ID: 11585930
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Requirement for Pbx1 in skeletal patterning and programming chondrocyte proliferation and differentiation.
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Development. 2001
PubMed ID: 11566859
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Clinical and experimental progression of a new model of human prostate cancer and therapeutic approach.
de Pinieux G, Legrier ME, Poirson-Bichat F, Courty Y, Bras-Gonçalves R, Dutrillaux AM, Némati F, Oudard S, Lidereau R, Broqua P, Junien JL, Dutrillaux B, Poupon MF
Am J Pathol. 2001
PubMed ID: 11485933
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Functional annotation of a full-length mouse cDNA collection.
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Nature. 2001
PubMed ID: 11217851
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Altered HOX and WNT7A expression in human lung cancer.
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Proc Natl Acad Sci U S A. 2000
PubMed ID: 11070089
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RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
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Genome Res. 2000
PubMed ID: 11076861
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Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
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Genome Res. 2000
PubMed ID: 11042159
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A large targeted deletion of Hoxb1-Hoxb9 produces a series of single-segment anterior homeotic transformations.
Medina-Martínez O, Bradley A, Ramírez-Solis R
Dev Biol. 2000
PubMed ID: 10885747
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The leukemia-associated protein Btg1 and the p53-regulated protein Btg2 interact with the homeoprotein Hoxb9 and enhance its transcriptional activation.
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J Biol Chem. 2000
PubMed ID: 10617598
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Neural induction and patterning in the mouse in the absence of the node and its derivatives.
Klingensmith J, Ang SL, Bachiller D, Rossant J
Dev Biol. 1999
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Murine fibroblast growth factor receptor 1alpha isoforms mediate node regression and are essential for posterior mesoderm development.
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Dev Biol. 1999
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Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy.
Chen F, Capecchi MR
Proc Natl Acad Sci U S A. 1999
PubMed ID: 9892669
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High-efficiency full-length cDNA cloning.
Carninci P, Hayashizaki Y
Methods Enzymol. 1999
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Comparative mapping of distal murine chromosome 11 and human 17q21.3 in a region containing a modifying locus for murine plasma von Willebrand factor level.
Mohlke KL, Purkayastha AA, Westrick RJ, Ginsburg D
Genomics. 1998
PubMed ID: 9806826
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Modulation of homeobox B6 and B9 genes expression in human leukemia cell lines during myelomonocytic differentiation.
Ohnishi K, Tobita T, Sinjo K, Takeshita A, Ohno R
Leuk Lymphoma. 1998
PubMed ID: 9922051
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Embryonic lethality and tumorigenesis caused by segmental aneuploidy on mouse chromosome 11.
Liu P, Zhang H, McLellan A, Vogel H, Bradley A
Genetics. 1998
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Opposite phenotypes of hypomorphic and Y766 phosphorylation site mutations reveal a function for Fgfr1 in anteroposterior patterning of mouse embryos.
Partanen J, Schwartz L, Rossant J
Genes Dev. 1998
PubMed ID: 9694798
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Fibroblast growth factor receptor 2 (FGFR2)-mediated reciprocal regulation loop between FGF8 and FGF10 is essential for limb induction.
Xu X, Weinstein M, Li C, Naski M, Cohen RI, Ornitz DM, Leder P, Deng C
Development. 1998
PubMed ID: 9435295
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Mesodermal defects and cranial neural crest apoptosis in alpha5 integrin-null embryos.
Goh KL, Yang JT, Hynes RO
Development. 1997
PubMed ID: 9334279
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Fibroblast growth factor receptor-1 (FGFR-1) is essential for normal neural tube and limb development.
Deng C, Bedford M, Li C, Xu X, Yang X, Dunmore J, Leder P
Dev Biol. 1997
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The Abd-B-like Hox homeodomain proteins can be subdivided by the ability to form complexes with Pbx1a on a novel DNA target.
Shen WF, Rozenfeld S, Lawrence HJ, Largman C
J Biol Chem. 1997
PubMed ID: 9079637
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Targeted mutations in hoxa-9 and hoxb-9 reveal synergistic interactions.
Chen F, Capecchi MR
Dev Biol. 1997
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A novel modifier gene for plasma von Willebrand factor level maps to distal mouse chromosome 11.
Mohlke KL, Nichols WC, Westrick RJ, Novak EK, Cooney KA, Swank RT, Ginsburg D
Proc Natl Acad Sci U S A. 1996
PubMed ID: 8986815
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Hoxb-13: a new Hox gene in a distant region of the HOXB cluster maintains colinearity.
Zeltser L, Desplan C, Heintz N
Development. 1996
PubMed ID: 8756292
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Fine mapping of human HOX gene clusters.
Apiou F, Flagiello D, Cillo C, Malfoy B, Poupon MF, Dutrillaux B
Cytogenet Cell Genet. 1996
PubMed ID: 8646877
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Notch1 is required for the coordinate segmentation of somites.
Conlon RA, Reaume AG, Rossant J
Development. 1995
PubMed ID: 7789282
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Hox genes and the evolution of vertebrate axial morphology.
Burke AC, Nelson CE, Morgan BA, Tabin C
Development. 1995
PubMed ID: 7768176
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Changes in homeobox-containing gene expression during ectopic bone formation induced by bone morphogenetic protein.
Iimura T, Oida S, Takeda K, Maruoka Y, Sasaki S
Biochem Biophys Res Commun. 1994
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brg1: a putative murine homologue of the Drosophila brahma gene, a homeotic gene regulator.
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Dev Biol. 1994
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Expression of class I homeobox genes in fetal and adult murine skin.
Detmer K, Lawrence HJ, Largman C
J Invest Dermatol. 1993
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Physical linkage of the murine Hox-b cluster and nerve growth factor receptor on yeast artificial chromosomes.
Bentley KL, Bradshaw MS, Ruddle FH
Genomics. 1993
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Functional analysis of the mouse homeobox gene HoxB9 in Drosophila development.
Malicki J, Bogarad LD, Martin MM, Ruddle FH, McGinnis W
Mech Dev. 1993
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Vertebrate homeobox gene nomenclature.
Scott MP
Cell. 1992
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The regulation of the murine Hox-2.5 gene expression during cell differentiation.
Kondo T, Takahashi N, Muramatsu M
Nucleic Acids Res. 1992
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Exogenous retinoic acid rapidly induces anterior ectopic expression of murine Hox-2 genes in vivo.
Conlon RA, Rossant J
Development. 1992
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Cell adhesion molecules as targets for Hox genes: neural cell adhesion molecule promoter activity is modulated by cotransfection with Hox-2.5 and -2.4.
Jones FS, Prediger EA, Bittner DA, De Robertis EM, Edelman GM
Proc Natl Acad Sci U S A. 1992
PubMed ID: 1347944
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Identification of 10 murine homeobox genes.
Singh G, Kaur S, Stock JL, Jenkins NA, Gilbert DJ, Copeland NG, Potter SS
Proc Natl Acad Sci U S A. 1991
PubMed ID: 1683707
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Selective expression of two homeobox genes in CD34-positive cells from human bone marrow.
Deguchi Y, Kehrl JH
Blood. 1991
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The murine Hox-2 genes display dynamic dorsoventral patterns of expression during central nervous system development.
Graham A, Maden M, Krumlauf R
Development. 1991
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The branchial Hox code and its implications for gene regulation, patterning of the nervous system and head evolution.
Hunt P, Whiting J, Nonchev S, Sham MH, Marshall H, Graham A, Cook M, Allemann R, Rigby PW, Gulisano M
Development. 1991
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Expression of HOX homeogenes in human neuroblastoma cell culture lines.
Peverali FA, D'Esposito M, Acampora D, Bunone G, Negri M, Faiella A, Stornaiuolo A, Pannese M, Migliaccio E, Simeone A
Differentiation. 1990
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Nomenclature for human homeobox genes.
McAlpine PJ, Shows TB
Genomics. 1990
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A yeast artificial chromosome containing the mouse homeobox cluster Hox-2.
Rubock MJ, Larin Z, Cook M, Papalopulu N, Krumlauf R, Lehrach H
Proc Natl Acad Sci U S A. 1990
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The human HOX gene family.
Acampora D, D'Esposito M, Faiella A, Pannese M, Migliaccio E, Morelli F, Stornaiuolo A, Nigro V, Simeone A, Boncinelli E
Nucleic Acids Res. 1989
PubMed ID: 2574852
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Segmental expression of Hox-2 homoeobox-containing genes in the developing mouse hindbrain.
Wilkinson DG, Bhatt S, Cook M, Boncinelli E, Krumlauf R
Nature. 1989
PubMed ID: 2571936
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Differential expression of human HOX-2 genes along the anterior-posterior axis in embryonic central nervous system.
Giampaolo A, Acampora D, Zappavigna V, Pannese M, D'Esposito M, Carè A, Faiella A, Stornaiuolo A, Russo G, Simeone A
Differentiation. 1989
PubMed ID: 2570724
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The developmental expression pattern of a new murine homeo box gene: Hox-2.5.
Bogarad LD, Utset MF, Awgulewitsch A, Miki T, Hart CP, Ruddle FH
Dev Biol. 1989
PubMed ID: 2567250
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The murine and Drosophila homeobox gene complexes have common features of organization and expression.
Graham A, Papalopulu N, Krumlauf R
Cell. 1989
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Organization of human class I homeobox genes.
Boncinelli E, Acampora D, Pannese M, D'Esposito M, Somma R, Gaudino G, Stornaiuolo A, Cafiero M, Faiella A, Simeone A
Genome. 1989
PubMed ID: 2576652
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Characterization of a murine homeo box gene, Hox-2.6, related to the Drosophila Deformed gene.
Graham A, Papalopulu N, Lorimer J, McVey JH, Tuddenham EG, Krumlauf R
Genes Dev. 1988
PubMed ID: 2463210
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Gene organization of murine homeobox-containing gene clusters.
Do MS, Lonai P
Genomics. 1988
PubMed ID: 2906328
Model Organism Phenotype Links
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