Home COL3A1
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(Human) GRCh37 - chr2:189839046..189877472 (38.43 kb) View in Genome Browser
(Mouse) NCBIM37 - chr1:45368383..45406551 (38.17 kb) View in Genome Browser
(Rat) RGSC3.4 - chr9:44281582..44317831 (36.25 kb) View in Genome Browser
HaemAtlas Expression Table for COL3A1:|
Expression Legend
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Cell Types Showing Expression: Available
Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
| Human | Mouse | Rat | ||||||||||
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| ductal cells | exocrine pancreas | pancreatic islets | primary beta cells | Pancreatic Islets MPSS | beta cell line | pancreatic islets | whole pancreas | alpha cell | beta cell line | pancreatic islets | primary beta cells | whole pancreas |
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The Beta Cell Gene Atlas is a collection of almost all available public microarray data generated with pancreatic beta cells and related cell lines and types. The expression data comes from 131 array analyses derived from 28 experiments (open details in a new window). The basal (untreated cell) expression signal intensity values in each array were converted to ranks within the experiments; the highest value was used for genes represented by more than one probe. The rank values of genes in a given cell type were averaged with other calculated values from experiments performed with the same cell type. The rank transformation of the expression values enable comparison of gene expression across different organisms and tissues.
A red border around a cell indicates greater certainty in the data; specifically, the gene has >0.95 probability of being expressed in the tissue.
Tissues Showing Expression: Available
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| Signal intensity values were converted to ranks within the experiments. For genes represented by more than one probeset, we averaged the intensity signals for each probeset across all tissues and chose the probeset with the highest average value. The rank transformation of the expression values enables comparison of gene expression across different organisms and tissues. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interactions Table for COL3A1:The COL3A1 interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.
The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.
| Interactor | Interactor | Sources | Classification | Pubmed IDs |
| COL3A1 | COL3A1 | IntAct | empirical | 14681455 |
| COL3A1 | FGF7 | HPRD | empirical | 11973338 |
| COL3A1 | MAG | HPRD, BioGRID | empirical | 2446864 |
| COL3A1 | MYOC | HPRD | empirical | 16289162 |
| COL3A1 | DDR2 | HPRD | empirical | 9659899 |
| COL3A1 | PCOLCE | HPRD | empirical | 12105202 |
| COL3A1 | HTRA1 | HPRD | empirical | 15101818 |
| COL3A1 | SPARC | HPRD, BioGRID | empirical | 2745554 |
| COL3A1 | THBS1 | HPRD, BioGRID | empirical | 3571333 |
| COL3A1 | TNF | IntAct | empirical | 17623297 |
| COL3A1 | DDR1 | HPRD | empirical | 9659900 |
| COL3A1 | CAPN1 | HPRD | empirical | 12358155 |
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Type 1 Diabetes Publications: 1
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Identification of transcripts with enriched expression in the developing and adult pancreas.
Hoffman BG, Zavaglia B, Witzsche J, Ruiz de Algara T, Beach M, Hoodless PA, Jones S, Marra MA, Helgason CD
Genome Biol. 2008
PubMed ID: 18554416
Publications: 272
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Transforming growth factor-β signaling in myogenic cells regulates vascular morphogenesis, differentiation, and matrix synthesis.
Jaffe M, Sesti C, Washington IM, Du L, Dronadula N, Chin MT, Stolz DB, Davis EC, Dichek DA
Arterioscler Thromb Vasc Biol. 2012
PubMed ID: 21979435
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Diagnosis of vascular Ehlers-Danlos syndrome in Italy: clinical findings and novel COL3A1 mutations.
Drera B, Zoppi N, Ritelli M, Tadini G, Venturini M, Wischmeijer A, Nicolazzi MA, Musumeci A, Penco S, Buscemi L, Crivelli S, Danesino C, Clementi M, Calzavara-Pinton P, Viglio S, Valli M, Barlati S, Colombi M
J Dermatol Sci. 2011
PubMed ID: 22019127
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Hemorrhagic bullae of the oral mucosa as an early manifestation of vascular-type ehlers-danlos syndrome.
Colebatch AN, Shaw EC, Foulds NC, Davidson BK
J Clin Rheumatol. 2011
PubMed ID: 21946467
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Exome sequencing supports a de novo mutational paradigm for schizophrenia.
Xu B, Roos JL, Dexheimer P, Boone B, Plummer B, Levy S, Gogos JA, Karayiorgou M
Nat Genet. 2011
PubMed ID: 21822266
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Isolation of mesenchymal stem cells from human ligamentum flavum: implicating etiology of ligamentum flavum hypertrophy.
Chen YT, Wei JD, Wang JP, Lee HH, Chiang ER, Lai HC, Chen LL, Lee YT, Tsai CC, Liu CL, Hung SC
Spine (Phila Pa 1976). 2011
PubMed ID: 21343850
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G protein-coupled receptor 56 and collagen III, a receptor-ligand pair, regulates cortical development and lamination.
Luo R, Jeong SJ, Jin Z, Strokes N, Li S, Piao X
Proc Natl Acad Sci U S A. 2011
PubMed ID: 21768377
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COL3A1 haploinsufficiency results in a variety of Ehlers-Danlos syndrome type IV with delayed onset of complications and longer life expectancy.
Leistritz DF, Pepin MG, Schwarze U, Byers PH
Genet Med. 2011
PubMed ID: 21637106
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A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature. 2011
PubMed ID: 21677750
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PITX2 insufficiency leads to atrial electrical and structural remodeling linked to arrhythmogenesis.
Chinchilla A, Daimi H, Lozano-Velasco E, Dominguez JN, Caballero R, Delpón E, Tamargo J, Cinca J, Hove-Madsen L, Aranega AE, Franco D
Circ Cardiovasc Genet. 2011
PubMed ID: 21511879
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Traumatic subarachnoid hemorrhage and the COL3A1 gene: emergence of a potential causal link.
Pickup MJ, Pollanen MS
Forensic Sci Med Pathol. 2011
PubMed ID: 21086191
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Global defects in collagen secretion in a Mia3/TANGO1 knockout mouse.
Wilson DG, Phamluong K, Li L, Sun M, Cao TC, Liu PS, Modrusan Z, Sandoval WN, Rangell L, Carano RA, Peterson AS, Solloway MJ
J Cell Biol. 2011
PubMed ID: 21606205
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Biological effect of resorbable plates on normal osteoblasts and osteoblasts derived from Pfeiffer syndrome.
Palmieri A, Zollino I, Clauser L, Lucchese A, Girardi A, Farinella F, Carinci F
J Craniofac Surg. 2011
PubMed ID: 21558934
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Haploinsufficiency of the murine Col3a1 locus causes aortic dissection: a novel model of the vascular type of Ehlers-Danlos syndrome.
Smith LB, Hadoke PW, Dyer E, Denvir MA, Brownstein D, Miller E, Nelson N, Wells S, Cheeseman M, Greenfield A
Cardiovasc Res. 2011
PubMed ID: 21071432
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The procollagen type III, alpha 1 (COL3A1) gene first intron expresses poly-A+ RNA corresponding to multiple ESTs and putative miRNAs.
Sterling KM
J Cell Biochem. 2011
PubMed ID: 21268075
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Defective Tbx2-dependent patterning of the atrioventricular canal myocardium causes accessory pathway formation in mice.
Aanhaanen WT, Boukens BJ, Sizarov A, Wakker V, de Gier-de Vries C, van Ginneken AC, Moorman AF, Coronel R, Christoffels VM
J Clin Invest. 2011
PubMed ID: 21266775
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Altered spatiotemporal expression of collagen types I, III, IV, and VI in Lpar3-deficient peri-implantation mouse uterus.
Diao H, Aplin JD, Xiao S, Chun J, Li Z, Chen S, Ye X
Biol Reprod. 2011
PubMed ID: 20864640
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The role of serum biomarkers in predicting fibrosis progression in pediatric and adult hepatitis C virus chronic infection.
Valva P, Casciato P, Diaz Carrasco JM, Gadano A, Galdame O, Galoppo MC, Mullen E, De Matteo E, Preciado MV
PLoS One. 2011
PubMed ID: 21858035
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Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways.
Thiagarajan RD, Georgas KM, Rumballe BA, Lesieur E, Chiu HS, Taylor D, Tang DT, Grimmond SM, Little MH
PLoS One. 2011
PubMed ID: 21386911
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A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nürnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dollé P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS Biol. 2011
PubMed ID: 21267068
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Diminished type III collagen promotes myofibroblast differentiation and increases scar deposition in cutaneous wound healing.
Volk SW, Wang Y, Mauldin EA, Liechty KW, Adams SL
Cells Tissues Organs. 2011
PubMed ID: 21252470
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Collagen binding specificity of the discoidin domain receptors: binding sites on collagens II and III and molecular determinants for collagen IV recognition by DDR1.
Xu H, Raynal N, Stathopoulos S, Myllyharju J, Farndale RW, Leitinger B
Matrix Biol. 2011
PubMed ID: 21044884
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Urinary type IV collagen in nondiabetic kidney disease.
Furumatsu Y, Nagasawa Y, Shoji T, Yamamoto R, Iio K, Matsui I, Takabatake Y, Kaimori JY, Iwatani H, Kaneko T, Tsubakihara Y, Imai E, Isaka Y, Rakugi H
Nephron Clin Pract. 2011
PubMed ID: 20699621
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Membrane-type MMPs are indispensable for placental labyrinth formation and development.
Szabova L, Son MY, Shi J, Sramko M, Yamada SS, Swaim WD, Zerfas P, Kahan S, Holmbeck K
Blood. 2010
PubMed ID: 20858856
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Activation of multiple signaling pathways causes developmental defects in mice with a Noonan syndrome–associated Sos1 mutation.
Chen PC, Wakimoto H, Conner D, Araki T, Yuan T, Roberts A, Seidman CE, Bronson R, Neel BG, Seidman JG, Kucherlapati R
J Clin Invest. 2010
PubMed ID: 21041952
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Epigenetic changes and alteration of Fbn1 and Col3A1 gene expression under hyperglycaemic and hyperinsulinaemic conditions.
Gaikwad AB, Gupta J, Tikoo K
Biochem J. 2010
PubMed ID: 20836762
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Hemizygous deletion of COL3A1, COL5A2, and MSTN causes a complex phenotype with aortic dissection: a lesson for and from true haploinsufficiency.
Meienberg J, Rohrbach M, Neuenschwander S, Spanaus K, Giunta C, Alonso S, Arnold E, Henggeler C, Regenass S, Patrignani A, Azzarello-Burri S, Steiner B, Nygren AO, Carrel T, Steinmann B, Mátyás G
Eur J Hum Genet. 2010
PubMed ID: 20648054
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Processing of procollagen III by meprins: new players in extracellular matrix assembly?
Kronenberg D, Bruns BC, Moali C, Vadon-Le Goff S, Sterchi EE, Traupe H, Böhm M, Hulmes DJ, Stöcker W, Becker-Pauly C
J Invest Dermatol. 2010
PubMed ID: 20631730
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Melatonin augments expression of the procollagen α1 (I) and α1 (III) genes in the infarcted heart scar of pinealectomized rats.
Drobnik J, Olczak S, Owczarek K, Hrabec Z, Hrabec E
Connect Tissue Res. 2010
PubMed ID: 20388018
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Pericytes are required for blood-brain barrier integrity during embryogenesis.
Daneman R, Zhou L, Kebede AA, Barres BA
Nature. 2010
PubMed ID: 20944625
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Aminoterminal propeptide of type III procollagen (PIIINP) is associated with ascending aortic aneurysm growth rate.
Ormezzano O, Baguet JP, Thony F, Blin D, Chavanon O, Toussaint B, Trocmé C, Vanzetto G, Faure P
Int J Cardiol. 2010
PubMed ID: 20227120
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A genetic association study of maternal and fetal candidate genes that predispose to preterm prelabor rupture of membranes (PROM).
Romero R, Friel LA, Velez Edwards DR, Kusanovic JP, Hassan SS, Mazaki-Tovi S, Vaisbuch E, Kim CJ, Erez O, Chaiworapongsa T, Pearce BD, Bartlett J, Salisbury BA, Anant MK, Vovis GF, Lee MS, Gomez R, Behnke E, Oyarzun E, Tromp G, Williams SM, Menon R
Am J Obstet Gynecol. 2010
PubMed ID: 20673868
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Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study.
Bailey SD, Xie C, Do R, Montpetit A, Diaz R, Mohan V, Keavney B, Yusuf S, Gerstein HC, Engert JC, Anand S, DREAM investigators
Diabetes Care. 2010
PubMed ID: 20628086
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Difference in expression of hepatic microRNAs miR-29c, miR-34a, miR-155, and miR-200b is associated with strain-specific susceptibility to dietary nonalcoholic steatohepatitis in mice.
Pogribny IP, Starlard-Davenport A, Tryndyak VP, Han T, Ross SA, Rusyn I, Beland FA
Lab Invest. 2010
PubMed ID: 20548288
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Effects of antisense transforming growth factor-beta1 gene transfer on the biological activities of tendon sheath fibroblasts.
Xia C, Ding C, Yang X, Sun K, Tian S
Orthopedics. 2010
PubMed ID: 20704113
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The Mohawk homeobox gene is a critical regulator of tendon differentiation.
Ito Y, Toriuchi N, Yoshitaka T, Ueno-Kudoh H, Sato T, Yokoyama S, Nishida K, Akimoto T, Takahashi M, Miyaki S, Asahara H
Proc Natl Acad Sci U S A. 2010
PubMed ID: 20498044
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Identification of fetal and maternal single nucleotide polymorphisms in candidate genes that predispose to spontaneous preterm labor with intact membranes.
Romero R, Velez Edwards DR, Kusanovic JP, Hassan SS, Mazaki-Tovi S, Vaisbuch E, Kim CJ, Chaiworapongsa T, Pearce BD, Friel LA, Bartlett J, Anant MK, Salisbury BA, Vovis GF, Lee MS, Gomez R, Behnke E, Oyarzun E, Tromp G, Williams SM, Menon R
Am J Obstet Gynecol. 2010
PubMed ID: 20452482
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MMP-12 catalytic domain recognizes and cleaves at multiple sites in human skin collagen type I and type III.
Taddese S, Jung MC, Ihling C, Heinz A, Neubert RH, Schmelzer CE
Biochim Biophys Acta. 2010
PubMed ID: 19932771
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Ehlers-Danlos syndrome type IV, vascular type, which demonstrated a novel point mutation in the COL3A1 gene.
Sadakata R, Hatamochi A, Kodama K, Kaga A, Yamaguchi T, Soma T, Usui Y, Nagata M, Ohtake A, Hagiwara K, Kanazawa M
Intern Med. 2010
PubMed ID: 20720362
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Maternal and fetal genetic associations of PTGER3 and PON1 with preterm birth.
Ryckman KK, Morken NH, White MJ, Velez DR, Menon R, Fortunato SJ, Magnus P, Williams SM, Jacobsson B
PLoS One. 2010
PubMed ID: 20140262
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Are integrin alpha(2)beta(1), glycoprotein Ib and vWf levels correlated with their contributions to platelet adhesion on collagen under high-shear flow?
Jung SM, Sonoda M, Tsuji K, Jimi A, Nomura S, Kanaji T, Moroi M
Platelets. 2010
PubMed ID: 20063990
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Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.
Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, Newhouse SJ, Dominiczak A, Samani NJ, Caulfield M, Sever P, Stanton A, Shields DC, Padmanabhan S, Melander O, Hastie C, Delles C, Ebrahim S, Marmot MG, Smith GD, Lawlor DA, Munroe PB, Day IN, Kivimaki M, Whittaker J, Humphries SE, Hingorani AD, ASCOT investigators, NORDIL investigators, BRIGHT Consortium
Am J Hum Genet. 2009
PubMed ID: 19913121
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Hepatocyte growth factor suppresses transforming growth factor-beta-1 and type III collagen in human primary renal fibroblasts.
Mou S, Wang Q, Shi B, Gu L, Ni Z
Kaohsiung J Med Sci. 2009
PubMed ID: 19858036
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Promotion of tumor cell migration by extracellular matrix proteins in human pancreatic cancer.
Ryschich E, Khamidjanov A, Kerkadze V, Büchler MW, Zöller M, Schmidt J
Pancreas. 2009
PubMed ID: 19893454
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Hypoxia-inducible factor 1alpha inhibits the fibroblast-like markers type I and type III collagen during hypoxia-induced chondrocyte redifferentiation: hypoxia not only induces type II collagen and aggrecan, but it also inhibits type I and type III collag
Duval E, Leclercq S, Elissalde JM, Demoor M, Galéra P, Boumédiene K
Arthritis Rheum. 2009
PubMed ID: 19790048
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Mutation of ACTA2 gene as an important cause of familial and nonfamilial nonsyndromatic thoracic aortic aneurysm and/or dissection (TAAD).
Morisaki H, Akutsu K, Ogino H, Kondo N, Yamanaka I, Tsutsumi Y, Yoshimuta T, Okajima T, Matsuda H, Minatoya K, Sasaki H, Tanaka H, Ishibashi-Ueda H, Morisaki T
Hum Mutat. 2009
PubMed ID: 19639654
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Differential expression of procollagen genes between mid- and late-gestational fetal fibroblasts.
Carter R, Jain K, Sykes V, Lanning D
J Surg Res. 2009
PubMed ID: 19560165
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COL3A1 2209G>A is a predictor of pelvic organ prolapse.
Kluivers KB, Dijkstra JR, Hendriks JC, Lince SL, Vierhout ME, van Kempen LC
Int Urogynecol J Pelvic Floor Dysfunct. 2009
PubMed ID: 19444361
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Association of genetic variants with chronic kidney disease in individuals with different lipid profiles.
Yoshida T, Kato K, Yokoi K, Oguri M, Watanabe S, Metoki N, Yoshida H, Satoh K, Aoyagi Y, Nishigaki Y, Nozawa Y, Yamada Y
Int J Mol Med. 2009
PubMed ID: 19578796
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Collagen type III alpha I is a gastro-oesophageal reflux disease susceptibility gene and a male risk factor for hiatus hernia.
Asling B, Jirholt J, Hammond P, Knutsson M, Walentinsson A, Davidson G, Agreus L, Lehmann A, Lagerström-Fermer M
Gut. 2009
PubMed ID: 19398442
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[Role of collagen III, CTGF and TNF-alpha in premature rupture of human fetal membranes]
Wang XJ, Li L, Cui SH
Sichuan Da Xue Xue Bao Yi Xue Ban. 2009
PubMed ID: 19764567
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Matrix metalloproteinase-1 cleavage site recognition and binding in full-length human type III collagen.
Williams KE, Olsen DR
Matrix Biol. 2009
PubMed ID: 19398000
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Association of gene polymorphisms with chronic kidney disease in high- or low-risk subjects defined by conventional risk factors.
Yoshida T, Kato K, Yokoi K, Oguri M, Watanabe S, Metoki N, Yoshida H, Satoh K, Aoyagi Y, Nishigaki Y, Nozawa Y, Yamada Y
Int J Mol Med. 2009
PubMed ID: 19424605
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Fog2 is critical for cardiac function and maintenance of coronary vasculature in the adult mouse heart.
Zhou B, Ma Q, Kong SW, Hu Y, Campbell PH, McGowan FX, Ackerman KG, Wu B, Zhou B, Tevosian SG, Pu WT
J Clin Invest. 2009
PubMed ID: 19411759
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Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP, Mouse Genome Sequencing Consortium
PLoS Biol. 2009
PubMed ID: 19468303
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[Effect of signal transducer and activator of transcription 1 antisense oligodeoxynucleotides on inflammatory mediators, type I and type III collagen mRNA of rat pulmonary fibrosis]
Wang WJ, Zeng M, Liu D, Fan XM, Zhu C, Zhan XQ
Xi Bao Yu Fen Zi Mian Yi Xue Za Zhi. 2009
PubMed ID: 19426591
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Extracellular matrix gene expression during wound healing of the injured rat vocal fold.
Ohno T, Hirano S, Rousseau B
Otolaryngol Head Neck Surg. 2009
PubMed ID: 19393425
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Intense pulsed light effects on the expression of extracellular matrix proteins and transforming growth factor beta-1 in skin dermal fibroblasts cultured within contracted collagen lattices.
Wong WR, Shyu WL, Tsai JW, Hsu KH, Pang JH
Dermatol Surg. 2009
PubMed ID: 19389097
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Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development.
Combes AN, Lesieur E, Harley VR, Sinclair AH, Little MH, Wilhelm D, Koopman P
Dev Dyn. 2009
PubMed ID: 19334288
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The relationship between COL3A1 exon 31 polymorphism and pelvic organ prolapse.
Jeon MJ, Chung SM, Choi JR, Jung HJ, Kim SK, Bai SW
J Urol. 2009
PubMed ID: 19152942
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Association of a polymorphism of the apolipoprotein E gene with chronic kidney disease in Japanese individuals with metabolic syndrome.
Yoshida T, Kato K, Fujimaki T, Yokoi K, Oguri M, Watanabe S, Metoki N, Yoshida H, Satoh K, Aoyagi Y, Nishigaki Y, Tanaka M, Nozawa Y, Yamada Y
Genomics. 2009
PubMed ID: 19056482
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Cardiac fibroblasts regulate myocardial proliferation through beta1 integrin signaling.
Ieda M, Tsuchihashi T, Ivey KN, Ross RS, Hong TT, Shaw RM, Srivastava D
Dev Cell. 2009
PubMed ID: 19217425
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Associations of 25 structural, degradative, and inflammatory candidate genes with lumbar disc desiccation, bulging, and height narrowing.
Videman T, Saarela J, Kaprio J, Näkki A, Levälahti E, Gill K, Peltonen L, Battié MC
Arthritis Rheum. 2009
PubMed ID: 19180518
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Spontaneous preterm birth in African Americans is associated with infection and inflammatory response gene variants.
Velez DR, Fortunato S, Thorsen P, Lombardi SJ, Williams SM, Menon R
Am J Obstet Gynecol. 2009
PubMed ID: 19019335
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If Racial disparity in pathophysiologic pathways of preterm birth based on genetic variants.
Menon R, Pearce B, Velez DR, Merialdi M, Williams SM, Fortunato SJ, Thorsen P
Reprod Biol Endocrinol. 2009
PubMed ID: 19527514
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Genetic association between functional haplotype of collagen type III alpha 1 and chronic hepatitis B and cirrhosis in Koreans.
Lee SK, Yi CH, Kim MH, Cheong JY, Cho SW, Yang SJ, Kwack K
Tissue Antigens. 2008
PubMed ID: 19000145
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Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries.
Boudko SP, Engel J, Okuyama K, Mizuno K, Bächinger HP, Schumacher MA
J Biol Chem. 2008
PubMed ID: 18805790
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Temporal and spatial expression of collagens during murine atrioventricular heart valve development and maintenance.
Peacock JD, Lu Y, Koch M, Kadler KE, Lincoln J
Dev Dyn. 2008
PubMed ID: 18816857
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Collagen type 3 alpha 1 polymorphism and risk of pelvic organ prolapse.
Chen HY, Chung YW, Lin WY, Wang JC, Tsai FJ, Tsai CH
Int J Gynaecol Obstet. 2008
PubMed ID: 18722615
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Differential regulation of collagen types I and III expression in cardiac fibroblasts by AGEs through TRB3/MAPK signaling pathway.
Tang M, Zhong M, Shang Y, Lin H, Deng J, Jiang H, Lu H, Zhang Y, Zhang W
Cell Mol Life Sci. 2008
PubMed ID: 18726071
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Role of membrane cholesterol in platelet calcium signalling in response to VWF and collagen under stasis and flow.
van Lier M, Verhoef S, Cauwenberghs S, Heemskerk JW, Akkerman JW, Heijnen HF
Thromb Haemost. 2008
PubMed ID: 18521510
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Expression of transforming growth factor beta isoforms and their roles in tendon healing.
Chan KM, Fu SC, Wong YP, Hui WC, Cheuk YC, Wong MW
Wound Repair Regen. 2008
PubMed ID: 18471258
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GUDMAP: the genitourinary developmental molecular anatomy project.
McMahon AP, Aronow BJ, Davidson DR, Davies JA, Gaido KW, Grimmond S, Lessard JL, Little MH, Potter SS, Wilder EL, Zhang P, GUDMAP project
J Am Soc Nephrol. 2008
PubMed ID: 18287559
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Natural variation in four human collagen genes across an ethnically diverse population.
Chan TF, Poon A, Basu A, Addleman NR, Chen J, Phong A, Byers PH, Klein TE, Kwok PY
Genomics. 2008
PubMed ID: 18272325
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A novel COL3A1 gene mutation in patient with aortic dissected aneurysm and cervical artery dissections.
Lee ST, Kim JA, Jang SY, Kim DK, Kim JW, Ki CS
Heart Vessels. 2008
PubMed ID: 18389341
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[Correlation of COL3A1 gene with type III collagen stability in intracranial aneurysm]
Hua T, Zhang D, Zhao YL, Wang S, Zhao JZ
Zhonghua Yi Xue Za Zhi. 2008
PubMed ID: 18642782
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Preterm birth in Caucasians is associated with coagulation and inflammation pathway gene variants.
Velez DR, Fortunato SJ, Thorsen P, Lombardi SJ, Williams SM, Menon R
PLoS ONE. 2008
PubMed ID: 18818748
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AGEs and glucose levels modulate type I and III procollagen mRNA synthesis in dermal fibroblasts cells culture.
Andreea SI, Marieta C, Anca D
Exp Diabetes Res. 2008
PubMed ID: 18401458
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Thrombospondin-1 and thrombospondin-2 mRNA and TSP-1 and TSP-2 protein expression in uterine fibroids and correlation to the genes COL1A1 and COL3A1 and to the collagen cross-link hydroxyproline.
Behera MA, Feng L, Yonish B, Catherino W, Jung SH, Leppert P
Reprod Sci. 2007
PubMed ID: 18089612
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Developmental changes in extracellular matrix messenger RNAs in the mouse placenta during the second half of pregnancy: possible factors involved in the regulation of placental extracellular matrix expression.
Arai KY, Nishiyama T
Biol Reprod. 2007
PubMed ID: 17881772
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Changes of collagen type III and decorin in paraurethral connective tissue from women with stress urinary incontinence and prolapse.
Song Y, Hong X, Yu Y, Lin Y
Int Urogynecol J Pelvic Floor Dysfunct. 2007
PubMed ID: 17396208
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Altered procollagen gene expression in mid-gestational mouse excisional wounds.
Goldberg SR, Quirk GL, Sykes VW, Kordula T, Lanning DA
J Surg Res. 2007
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Selective retention and degradation of molecules with a single mutant alpha1(I) chain in the Brtl IV mouse model of OI.
Forlino A, Kuznetsova NV, Marini JC, Leikin S
Matrix Biol. 2007
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RNAi-mediated inhibition of COL1A1 and COL3A1 in human skin fibroblasts.
Wang Q, Peng Z, Xiao S, Geng S, Yuan J, Li Z
Exp Dermatol. 2007
PubMed ID: 17576241
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High glucose promotes the production of collagen types I and III by cardiac fibroblasts through a pathway dependent on extracellular-signal-regulated kinase 1/2.
Tang M, Zhang W, Lin H, Jiang H, Dai H, Zhang Y
Mol Cell Biochem. 2007
PubMed ID: 17206378
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Expression of decorin and collagens I and III in different layers of human skin in vivo: a laser capture microdissection study.
Lochner K, Gaemlich A, Südel KM, Venzke K, Moll I, Knott A, Stäb F, Wenck H, Döring O, Böttger M, Gallinat S
Biogerontology. 2007
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[Effects of pioglitazone on the morphology and the expression of connective tissue growth factor of transforming growth factor beta-induced rat hepatic stellate cells in vitro]
Jia JB, Liu Y, Chen WH, Liu M, Lu LG
Zhonghua Gan Zang Bing Za Zhi. 2007
PubMed ID: 17407709
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Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.
Molina H, Horn DM, Tang N, Mathivanan S, Pandey A
Proc Natl Acad Sci U S A. 2007
PubMed ID: 17287340
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Loss of assembly of the main basement membrane collagen, type IV, but not fibril-forming collagens and embryonic death in collagen prolyl 4-hydroxylase I null mice.
Holster T, Pakkanen O, Soininen R, Sormunen R, Nokelainen M, Kivirikko KI, Myllyharju J
J Biol Chem. 2007
PubMed ID: 17135260
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Distribution of collagen types I, III, and V in pregnant mouse endometrium.
Spiess K, Teodoro WR, Zorn TM
Connect Tissue Res. 2007
PubMed ID: 17453912
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ColVa1 and ColXIa1 are required for myocardial morphogenesis and heart valve development.
Lincoln J, Florer JB, Deutsch GH, Wenstrup RJ, Yutzey KE
Dev Dyn. 2006
PubMed ID: 17029294
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A single high-affinity binding site for von Willebrand factor in collagen III, identified using synthetic triple-helical peptides.
Lisman T, Raynal N, Groeneveld D, Maddox B, Peachey AR, Huizinga EG, de Groot PG, Farndale RW
Blood. 2006
PubMed ID: 16912226
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The consensus coding sequences of human breast and colorectal cancers.
Sjöblom T, Jones S, Wood LD, Parsons DW, Lin J, Barber TD, Mandelker D, Leary RJ, Ptak J, Silliman N, Szabo S, Buckhaults P, Farrell C, Meeh P, Markowitz SD, Willis J, Dawson D, Willson JK, Gazdar AF, Hartigan J, Wu L, Liu C, Parmigiani G, Park BH, Bachman KE, Papadopoulos N, Vogelstein B, Kinzler KW, Velculescu VE
Science. 2006
PubMed ID: 16959974
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Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.
Später D, Hill TP, O'sullivan RJ, Gruber M, Conner DA, Hartmann C
Development. 2006
PubMed ID: 16818445
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Collagens are functional, high affinity ligands for the inhibitory immune receptor LAIR-1.
Lebbink RJ, de Ruiter T, Adelmeijer J, Brenkman AB, van Helvoort JM, Koch M, Farndale RW, Lisman T, Sonnenberg A, Lenting PJ, Meyaard L
J Exp Med. 2006
PubMed ID: 16754721
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Multifactor complex containing B element binding factor, BBF, and repressors regulate the human alpha 1(III) collagen gene (COL3A1).
Sumiyoshi H, Matsuo N, Shin T, Shirabe K, Yoshioka H
Acta Med Okayama. 2006
PubMed ID: 16838047
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The identification of myocilin-associated proteins in the human trabecular meshwork.
Fautsch MP, Vrabel AM, Johnson DH
Exp Eye Res. 2006
PubMed ID: 16289162
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Interstitial fibrosis in the heart: differences in extracellular matrix proteins and matrix metalloproteinases in end-stage dilated, ischaemic and valvular cardiomyopathy.
Herpel E, Pritsch M, Koch A, Dengler TJ, Schirmacher P, Schnabel PA
Histopathology. 2006
PubMed ID: 16681691
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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Magdaleno S, Jensen P, Brumwell CL, Seal A, Lehman K, Asbury A, Cheung T, Cornelius T, Batten DM, Eden C, Norland SM, Rice DS, Dosooye N, Shakya S, Mehta P, Curran T
PLoS Biol. 2006
PubMed ID: 16602821
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Regulation of procollagen amino-propeptide processing during mouse embryogenesis by specialization of homologous ADAMTS proteases: insights on collagen biosynthesis and dermatosparaxis.
Le Goff C, Somerville RP, Kesteloot F, Powell K, Birk DE, Colige AC, Apte SS
Development. 2006
PubMed ID: 16556917
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Links between alpha-catenin, NF-kappaB, and squamous cell carcinoma in skin.
Kobielak A, Fuchs E
Proc Natl Acad Sci U S A. 2006
PubMed ID: 16452166
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Detection of up-regulated genes in thrombin-stimulated human umbilical vein endothelial cells.
Okada M, Suzuki K, Takada K, Nakashima M, Nakanishi T, Shinohara T
Thromb Res. 2006
PubMed ID: 16356540
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Transforming growth factor-beta1-induced hypertrophy and matrix expression in human bladder smooth muscle cells.
Howard PS, Kucich U, Coplen DE, He Y
Urology. 2005
PubMed ID: 16360482
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periostin null mice exhibit dwarfism, incisor enamel defects, and an early-onset periodontal disease-like phenotype.
Rios H, Koushik SV, Wang H, Wang J, Zhou HM, Lindsley A, Rogers R, Chen Z, Maeda M, Kruzynska-Frejtag A, Feng JQ, Conway SJ
Mol Cell Biol. 2005
PubMed ID: 16314533
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Dysregulation of TGF-beta1 receptor activation leads to abnormal lung development and emphysema-like phenotype in core fucose-deficient mice.
Wang X, Inoue S, Gu J, Miyoshi E, Noda K, Li W, Mizuno-Horikawa Y, Nakano M, Asahi M, Takahashi M, Uozumi N, Ihara S, Lee SH, Ikeda Y, Yamaguchi Y, Aze Y, Tomiyama Y, Fujii J, Suzuki K, Kondo A, Shapiro SD, Lopez-Otin C, Kuwaki T, Okabe M, Honke K, Taniguchi N
Proc Natl Acad Sci U S A. 2005
PubMed ID: 16236725
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A novel binding site in collagen type III for integrins alpha1beta1 and alpha2beta1.
Kim JK, Xu Y, Xu X, Keene DR, Gurusiddappa S, Liang X, Wary KK, Höök M
J Biol Chem. 2005
PubMed ID: 16043429
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Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
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The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
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Localization of precursor proteins and mRNA of type I and III collagens in usual interstitial pneumonia and sarcoidosis.
Kaarteenaho-Wiik R, Lammi L, Lakari E, Kinnula VL, Risteli J, Ryhänen L, Pääkkö P
J Mol Histol. 2005
PubMed ID: 16521042
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Downregulation of human type III collagen gene expression by antisense oligodeoxynucleotide.
Jia F, Shimomura T, Niyibizi C, Woo SL
Tissue Eng. 2005
PubMed ID: 16259598
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Decreased production of collagen Type III in cultured smooth muscle cells from varicose vein patients is due to a degradation by MMPs: possible implication of MMP-3.
Sansilvestri-Morel P, Rupin A, Jullien ND, Lembrez N, Mestries-Dubois P, Fabiani JN, Verbeuren TJ
J Vasc Res. 2005
PubMed ID: 16088212
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Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes.
Bulfone A, Carotenuto P, Faedo A, Aglio V, Garzia L, Bello AM, Basile A, Andrè A, Cocchia M, Guardiola O, Ballabio A, Rubenstein JL, Zollo M
J Neurosci. 2005
PubMed ID: 16107646
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Multiple proteins are involved in the protein-DNA complex in the proximal promoter of the human alpha1(III) collagen gene (COL3A1).
Yoshino T, Sumiyoshi H, Shin T, Matsuo N, Inagaki Y, Ninomiya Y, Yoshioka H
Biochim Biophys Acta. 2005
PubMed ID: 15894390
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Genetic analysis of polymorphisms in biologically relevant candidate genes in patients with abdominal aortic aneurysms.
Ogata T, Shibamura H, Tromp G, Sinha M, Goddard KA, Sakalihasan N, Limet R, MacKean GL, Arthur C, Sueda T, Land S, Kuivaniemi H
J Vasc Surg. 2005
PubMed ID: 15944607
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Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
Hillier LW, Graves TA, Fulton RS, Fulton LA, Pepin KH, Minx P, Wagner-McPherson C, Layman D, Wylie K, Sekhon M, Becker MC, Fewell GA, Delehaunty KD, Miner TL, Nash WE, Kremitzki C, Oddy L, Du H, Sun H, Bradshaw-Cordum H, Ali J, Carter J, Cordes M, Harris A, Isak A, van Brunt A, Nguyen C, Du F, Courtney L, Kalicki J, Ozersky P, Abbott S, Armstrong J, Belter EA, Caruso L, Cedroni M, Cotton M, Davidson T, Desai A, Elliott G, Erb T, Fronick C, Gaige T, Haakenson W, Haglund K, Holmes A, Harkins R, Kim K, Kruchowski SS, Strong CM, Grewal N, Goyea E, Hou S, Levy A, Martinka S, Mead K, McLellan MD, Meyer R, Randall-Maher J, Tomlinson C, Dauphin-Kohlberg S, Kozlowicz-Reilly A, Shah N, Swearengen-Shahid S, Snider J, Strong JT, Thompson J, Yoakum M, Leonard S, Pearman C, Trani L, Radionenko M, Waligorski JE, Wang C, Rock SM, Tin-Wollam AM, Maupin R, Latreille P, Wendl MC, Yang SP, Pohl C, Wallis JW, Spieth J, Bieri TA, Berkowicz N, Nelson JO, Osborne J, Ding L, Meyer R, Sabo A, Shotland Y, Sinha P, Wohldmann PE, Cook LL, Hickenbotham MT, Eldred J, Williams D, Jones TA, She X, Ciccarelli FD, Izaurralde E, Taylor J, Schmutz J, Myers RM, Cox DR, Huang X, McPherson JD, Mardis ER, Clifton SW, Warren WC, Chinwalla AT, Eddy SR, Marra MA, Ovcharenko I, Furey TS, Miller W, Eichler EE, Bork P, Suyama M, Torrents D, Waterston RH, Wilson RK
Nature. 2005
PubMed ID: 15815621
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Candidate downstream regulated genes of HOX group 13 transcription factors with and without monomeric DNA binding capability.
Williams TM, Williams ME, Kuick R, Misek D, McDonagh K, Hanash S, Innis JW
Dev Biol. 2005
PubMed ID: 15733672
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Superimposing polymorphism: the case of a point mutation within a polymorphic Alu insertion.
Martinez L, Reategui EP, Fonseca LR, Sierra-Montes JM, Terreros MC, Pereira-Simon S, Herrera RJ
Hum Hered. 2005
PubMed ID: 15838180
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Interleukin-1beta enhanced action of kinins on extracellular matrix of spontaneous hypertensive rat cardiac fibroblasts.
Imai C, Okamura A, Peng JF, Kitamura Y, Printz MP
Clin Exp Hypertens. 2005
PubMed ID: 15773230
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A neurogenomics approach to gene expression analysis in the developing brain.
Jensen P, Magdaleno S, Lehman KM, Rice DS, Lavallie ER, Collins-Racie L, McCoy JM, Curran T
Brain Res Mol Brain Res. 2004
PubMed ID: 15582152
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RNA-binding proteins heterogeneous nuclear ribonucleoprotein A1, E1, and K are involved in post-transcriptional control of collagen I and III synthesis.
Thiele BJ, Doller A, Kähne T, Pregla R, Hetzer R, Regitz-Zagrosek V
Circ Res. 2004
PubMed ID: 15514164
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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Morrin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J, MGC Project Team
Genome Res. 2004
PubMed ID: 15489334
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Stability related bias in residues replacing glycines within the collagen triple helix (Gly-Xaa-Yaa) in inherited connective tissue disorders.
Persikov AV, Pillitteri RJ, Amin P, Schwarze U, Byers PH, Brodsky B
Hum Mutat. 2004
PubMed ID: 15365990
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Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions.
Suzuki Y, Yamashita R, Shirota M, Sakakibara Y, Chiba J, Mizushima-Sugano J, Nakai K, Sugano S
Genome Res. 2004
PubMed ID: 15342556
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Binding of proteins to the PDZ domain regulates proteolytic activity of HtrA1 serine protease.
Murwantoko, Yano M, Ueta Y, Murasaki A, Kanda H, Oka C, Kawaichi M
Biochem J. 2004
PubMed ID: 15101818
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Association between COL3A1 collagen gene exon 31 polymorphism and risk of floppy mitral valve/mitral valve prolapse.
Chou HT, Hung JS, Chen YT, Wu JY, Tsai FJ
Int J Cardiol. 2004
PubMed ID: 15193836
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Human fibroblasts with mutations in COL5A1 and COL3A1 genes do not organize collagens and fibronectin in the extracellular matrix, down-regulate alpha2beta1 integrin, and recruit alphavbeta3 Instead of alpha5beta1 integrin.
Zoppi N, Gardella R, De Paepe A, Barlati S, Colombi M
J Biol Chem. 2004
PubMed ID: 14970208
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High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence.
Kwitek AE, Gullings-Handley J, Yu J, Carlos DC, Orlebeke K, Nie J, Eckert J, Lemke A, Andrae JW, Bromberg S, Pasko D, Chen D, Scheetz TE, Casavant TL, Soares MB, Sheffield VC, Tonellato PJ, Jacob HJ
Genome Res. 2004
PubMed ID: 15060019
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Collagen and tenascin-C expression along the migration pathway of mouse primordial germ cells.
Soto-Suazo M, San Martin S, Zorn TM
Histochem Cell Biol. 2004
PubMed ID: 14758483
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The effects of single doses of beta radiation on the wound healing behaviour of human Tenon's capsule fibroblasts.
Constable PH, Crowston JG, Occleston NL, Khaw PT
Br J Ophthalmol. 2004
PubMed ID: 14736764
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Collagen synthesis is not altered in women with stress urinary incontinence.
Chen Y, DeSautel M, Anderson A, Badlani G, Kushner L
Neurourol Urodyn. 2004
PubMed ID: 15227656
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Complete sequencing and characterization of 21,243 full-length human cDNAs.
Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S
Nat Genet. 2004
PubMed ID: 14702039
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Connective tissue growth factor and igf-I are produced by human renal fibroblasts and cooperate in the induction of collagen production by high glucose.
Lam S, van der Geest RN, Verhagen NA, van Nieuwenhoven FA, Blom IE, Aten J, Goldschmeding R, Daha MR, van Kooten C
Diabetes. 2003
PubMed ID: 14633859
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Interaction of Smads with collagen types I, III, and V.
Ellis LR, Warner DR, Greene RM, Pisano MM
Biochem Biophys Res Commun. 2003
PubMed ID: 14559231
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Collagen XXIV, a vertebrate fibrillar collagen with structural features of invertebrate collagens: selective expression in developing cornea and bone.
Koch M, Laub F, Zhou P, Hahn RA, Tanaka S, Burgeson RE, Gerecke DR, Ramirez F, Gordon MK
J Biol Chem. 2003
PubMed ID: 12874293
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Quinapril inhibits progression of heart failure and fibrosis in rats with dilated cardiomyopathy after myocarditis.
Juan W, Nakazawa M, Watanabe K, Ma M, Wahed MI, Hasegawa G, Naito M, Yamamoto T, Fuse K, Kato K, Kodama M, Aizawa Y
Mol Cell Biochem. 2003
PubMed ID: 14575307
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Increased skin collagen extractability and proportions of collagen type III are not normalized after 6 months healing of human excisional wounds.
Robins SP, Milne G, Duncan A, Davies C, Butt R, Greiling D, James IT
J Invest Dermatol. 2003
PubMed ID: 12880417
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Evidence for an extensive collagen type III proximal domain in the rat femur. II. Expansion with exercise.
Saino H, Luther F, Carter DH, Natali AJ, Turner DL, Shahtaheri SM, Aaron JE
Bone. 2003
PubMed ID: 12810173
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Evidence for an extensive collagen type III/VI proximal domain in the rat femur. I. Diminution with ovariectomy.
Luther F, Saino H, Carter DH, Aaron JE
Bone. 2003
PubMed ID: 12810172
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Neurological presentation of Ehlers-Danlos syndrome type IV in a family with parental mosaicism.
Palmeri S, Mari F, Meloni I, Malandrini A, Ariani F, Villanova M, Pompilio A, Schwarze U, Byers PH, Renieri A
Clin Genet. 2003
PubMed ID: 12786757
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Transcriptional activation of alpha 1(III) procollagen gene in Tsk2/+ dermal fibroblasts.
Christner PJ, Yufit T, Peters J, McGrath R, Conway RF, Jiménez SA
Biochem Biophys Res Commun. 2003
PubMed ID: 12659831
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Ehlers-Danlos syndrome type IV: unusual congenital anomalies in a mother and son with a COL3A1 mutation and a normal collagen III protein profile.
Kroes HY, Pals G, van Essen AJ
Clin Genet. 2003
PubMed ID: 12694234
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Glucose-induced fibronectin and collagen type III expression in renal fibroblasts can occur independent of TGF-beta1.
Lam S, Verhagen NA, Strutz F, van der Pijl JW, Daha MR, van Kooten C
Kidney Int. 2003
PubMed ID: 12631068
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Sox5 and Sox6 are required for notochord extracellular matrix sheath formation, notochord cell survival and development of the nucleus pulposus of intervertebral discs.
Smits P, Lefebvre V
Development. 2003
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Extracellular matrix protein expression during mouse detrusor development.
Smeulders N, Woolf AS, Wilcox DT
J Pediatr Surg. 2003
PubMed ID: 12592609
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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
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Proc Natl Acad Sci U S A. 2002
PubMed ID: 12477932
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group Phase I & II Team
Nature. 2002
PubMed ID: 12466851
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Initial sequencing and comparative analysis of the mouse genome.
Mouse Genome Sequencing Consortium, Waterston RH, Lindblad-Toh K, Birney E, Rogers J, Abril JF, Agarwal P, Agarwala R, Ainscough R, Alexandersson M, An P, Antonarakis SE, Attwood J, Baertsch R, Bailey J, Barlow K, Beck S, Berry E, Birren B, Bloom T, Bork P, Botcherby M, Bray N, Brent MR, Brown DG, Brown SD, Bult C, Burton J, Butler J, Campbell RD, Carninci P, Cawley S, Chiaromonte F, Chinwalla AT, Church DM, Clamp M, Clee C, Collins FS, Cook LL, Copley RR, Coulson A, Couronne O, Cuff J, Curwen V, Cutts T, Daly M, David R, Davies J, Delehaunty KD, Deri J, Dermitzakis ET, Dewey C, Dickens NJ, Diekhans M, Dodge S, Dubchak I, Dunn DM, Eddy SR, Elnitski L, Emes RD, Eswara P, Eyras E, Felsenfeld A, Fewell GA, Flicek P, Foley K, Frankel WN, Fulton LA, Fulton RS, Furey TS, Gage D, Gibbs RA, Glusman G, Gnerre S, Goldman N, Goodstadt L, Grafham D, Graves TA, Green ED, Gregory S, Guigó R, Guyer M, Hardison RC, Haussler D, Hayashizaki Y, Hillier LW, Hinrichs A, Hlavina W, Holzer T, Hsu F, Hua A, Hubbard T, Hunt A, Jackson I, Jaffe DB, Johnson LS, Jones M, Jones TA, Joy A, Kamal M, Karlsson EK, Karolchik D, Kasprzyk A, Kawai J, Keibler E, Kells C, Kent WJ, Kirby A, Kolbe DL, Korf I, Kucherlapati RS, Kulbokas EJ, Kulp D, Landers T, Leger JP, Leonard S, Letunic I, Levine R, Li J, Li M, Lloyd C, Lucas S, Ma B, Maglott DR, Mardis ER, Matthews L, Mauceli E, Mayer JH, McCarthy M, McCombie WR, McLaren S, McLay K, McPherson JD, Meldrim J, Meredith B, Mesirov JP, Miller W, Miner TL, Mongin E, Montgomery KT, Morgan M, Mott R, Mullikin JC, Muzny DM, Nash WE, Nelson JO, Nhan MN, Nicol R, Ning Z, Nusbaum C, O'Connor MJ, Okazaki Y, Oliver K, Overton-Larty E, Pachter L, Parra G, Pepin KH, Peterson J, Pevzner P, Plumb R, Pohl CS, Poliakov A, Ponce TC, Ponting CP, Potter S, Quail M, Reymond A, Roe BA, Roskin KM, Rubin EM, Rust AG, Santos R, Sapojnikov V, Schultz B, Schultz J, Schwartz MS, Schwartz S, Scott C, Seaman S, Searle S, Sharpe T, Sheridan A, Shownkeen R, Sims S, Singer JB, Slater G, Smit A, Smith DR, Spencer B, Stabenau A, Stange-Thomann N, Sugnet C, Suyama M, Tesler G, Thompson J, Torrents D, Trevaskis E, Tromp J, Ucla C, Ureta-Vidal A, Vinson JP, Von Niederhausern AC, Wade CM, Wall M, Weber RJ, Weiss RB, Wendl MC, West AP, Wetterstrand K, Wheeler R, Whelan S, Wierzbowski J, Willey D, Williams S, Wilson RK, Winter E, Worley KC, Wyman D, Yang S, Yang SP, Zdobnov EM, Zody MC, Lander ES
Nature. 2002
PubMed ID: 12466850
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Interaction properties of the procollagen C-proteinase enhancer protein shed light on the mechanism of stimulation of BMP-1.
Ricard-Blum S, Bernocco S, Font B, Moali C, Eichenberger D, Farjanel J, Burchardt ER, van der Rest M, Kessler E, Hulmes DJ
J Biol Chem. 2002
PubMed ID: 12105202
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Genetic variability in the extracellular matrix as a determinant of cardiovascular risk: association of type III collagen COL3A1 polymorphisms with coronary artery disease.
Muckian C, Fitzgerald A, O'Neill A, O'Byrne A, Fitzgerald DJ, Shields DC
Blood. 2002
PubMed ID: 12149201
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The epithelial mitogen keratinocyte growth factor binds to collagens via the consensus sequence glycine-proline-hydroxyproline.
Ruehl M, Somasundaram R, Schoenfelder I, Farndale RW, Knight CG, Schmid M, Ackermann R, Riecken EO, Zeitz M, Schuppan D
J Biol Chem. 2002
PubMed ID: 11973338
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Screening the proteins that interact with calpain in a human heart cDNA library using a yeast two-hybrid system.
Jiang LQ, Wen SJ, Wang HY, Chen LY
Hypertens Res. 2002
PubMed ID: 12358155
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Analysis of the COL3A1 gene in patients with spontaneous cervical artery dissections.
von Pein F, Välkkilä M, Schwarz R, Morcher M, Klima B, Grau A, Ala-Kokko L, Hausser I, Brandt T, Grond-Ginsbach C
J Neurol. 2002
PubMed ID: 12140670
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Gene expression profile of human bone marrow stromal cells: high-throughput expressed sequence tag sequencing analysis.
Jia L, Young MF, Powell J, Yang L, Ho NC, Hotchkiss R, Robey PG, Francomano CA
Genomics. 2002
PubMed ID: 11827452
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Haploinsufficiency for one COL3A1 allele of type III procollagen results in a phenotype similar to the vascular form of Ehlers-Danlos syndrome, Ehlers-Danlos syndrome type IV.
Schwarze U, Schievink WI, Petty E, Jaff MR, Babovic-Vuksanovic D, Cherry KJ, Pepin M, Byers PH
Am J Hum Genet. 2001
PubMed ID: 11577371
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Genomic organization of the human COL3A1 and COL5A2 genes: COL5A2 has evolved differently than the other minor fibrillar collagen genes.
Välkkilä M, Melkoniemi M, Kvist L, Kuivaniemi H, Tromp G, Ala-Kokko L
Matrix Biol. 2001
PubMed ID: 11566270
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Amplification of extracellular matrix and oncogenes in tat-transfected human salivary gland cell lines with expression of laminin, fibronectin, collagens I, III, IV, c-myc and p53.
McArthur CP, Wang Y, Heruth D, Gustafson S
Arch Oral Biol. 2001
PubMed ID: 11311202
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Discoidin domain receptor 1 tyrosine kinase has an essential role in mammary gland development.
Vogel WF, Aszódi A, Alves F, Pawson T
Mol Cell Biol. 2001
PubMed ID: 11283268
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Functional annotation of a full-length mouse cDNA collection.
Kawai J, Shinagawa A, Shibata K, Yoshino M, Itoh M, Ishii Y, Arakawa T, Hara A, Fukunishi Y, Konno H, Adachi J, Fukuda S, Aizawa K, Izawa M, Nishi K, Kiyosawa H, Kondo S, Yamanaka I, Saito T, Okazaki Y, Gojobori T, Bono H, Kasukawa T, Saito R, Kadota K, Matsuda H, Ashburner M, Batalov S, Casavant T, Fleischmann W, Gaasterland T, Gissi C, King B, Kochiwa H, Kuehl P, Lewis S, Matsuo Y, Nikaido I, Pesole G, Quackenbush J, Schriml LM, Staubli F, Suzuki R, Tomita M, Wagner L, Washio T, Sakai K, Okido T, Furuno M, Aono H, Baldarelli R, Barsh G, Blake J, Boffelli D, Bojunga N, Carninci P, de Bonaldo MF, Brownstein MJ, Bult C, Fletcher C, Fujita M, Gariboldi M, Gustincich S, Hill D, Hofmann M, Hume DA, Kamiya M, Lee NH, Lyons P, Marchionni L, Mashima J, Mazzarelli J, Mombaerts P, Nordone P, Ring B, Ringwald M, Rodriguez I, Sakamoto N, Sasaki H, Sato K, Schönbach C, Seya T, Shibata Y, Storch KF, Suzuki H, Toyo-oka K, Wang KH, Weitz C, Whittaker C, Wilming L, Wynshaw-Boris A, Yoshida K, Hasegawa Y, Kawaji H, Kohtsuki S, Hayashizaki Y, RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium
Nature. 2001
PubMed ID: 11217851
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Length of uninterrupted repeats determines instability at the unstable mouse expanded simple tandem repeat family MMS10 derived from independent SINE B1 elements.
Bois PR, Southgate L, Jeffreys AJ
Mamm Genome. 2001
PubMed ID: 11210178
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Ehlers-Danlos syndrome type IV with a unique point mutation in COL3A1 and familial phenotype of myocardial infarction without organic coronary stenosis.
Nishiyama Y, Nejima J, Watanabe A, Kotani E, Sakai N, Hatamochi A, Shinkai H, Kiuchi K, Tamura K, Shimada T, Takano T, Katayama Y
J Intern Med. 2001
PubMed ID: 11168790
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RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
Shibata K, Itoh M, Aizawa K, Nagaoka S, Sasaki N, Carninci P, Konno H, Akiyama J, Nishi K, Kitsunai T, Tashiro H, Itoh M, Sumi N, Ishii Y, Nakamura S, Hazama M, Nishine T, Harada A, Yamamoto R, Matsumoto H, Sakaguchi S, Ikegami T, Kashiwagi K, Fujiwake S, Inoue K, Togawa Y
Genome Res. 2000
PubMed ID: 11076861
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Large-scale screen for genes involved in gonad development.
Wertz K, Herrmann BG
Mech Dev. 2000
PubMed ID: 11044607
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Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
Carninci P, Shibata Y, Hayatsu N, Sugahara Y, Shibata K, Itoh M, Konno H, Okazaki Y, Muramatsu M, Hayashizaki Y
Genome Res. 2000
PubMed ID: 11042159
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Embryonic lethality of molecular chaperone hsp47 knockout mice is associated with defects in collagen biosynthesis.
Nagai N, Hosokawa M, Itohara S, Adachi E, Matsushita T, Hosokawa N, Nagata K
J Cell Biol. 2000
PubMed ID: 10995453
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Characterization of 11 new mutations in COL3A1 of individuals with Ehlers-Danlos syndrome type IV: preliminary comparison of RNase cleavage, EMC and DHPLC assays.
Giunta C, Steinmann B
Hum Mutat. 2000
PubMed ID: 10923041
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Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray.
Tanaka TS, Jaradat SA, Lim MK, Kargul GJ, Wang X, Grahovac MJ, Pantano S, Sano Y, Piao Y, Nagaraja R, Doi H, Wood WH, Becker KG, Ko MS
Proc Natl Acad Sci U S A. 2000
PubMed ID: 10922068
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Clinical and genetic features of Ehlers-Danlos syndrome type IV, the vascular type.
Pepin M, Schwarze U, Superti-Furga A, Byers PH
N Engl J Med. 2000
PubMed ID: 10706896
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COL3A1 mutation leading to acrogeria (Gottron Type)
Jansen T, de Paepe A, Luytinck N, Plewig G
Br J Dermatol. 2000
PubMed ID: 10819545
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Abnormalities of extracellular matrices and transforming growth factor beta1 localization in the kidney of the hereditary nephrotic mice (ICGN strain).
Uchio K, Manabe N, Kinoshita A, Tamura K, Miyamoto M, Ogura A, Yamamoto Y, Miyamoto H
J Vet Med Sci. 1999
PubMed ID: 10458099
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Facial development and type III collagen RNA expression: concurrent repression in the osteopetrotic (Toothless,tl) rat and rescue after treatment with colony-stimulating factor-1.
Marks SC, Lundmark C, Wurtz T, Odgren PR, MacKay CA, Mason-Savas A, Popoff SN
Dev Dyn. 1999
PubMed ID: 10373016
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Large kindred with Ehlers-Danlos syndrome type IV due to a point mutation (G571S) in the COL3A1 gene of type III procollagen: low risk of pregnancy complications and unexpected longevity in some affected relatives.
Gilchrist D, Schwarze U, Shields K, MacLaren L, Bridge PJ, Byers PH
Am J Med Genet. 1999
PubMed ID: 10051163
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Coexpression of the lysyl oxidase-like gene (LOXL) and the gene encoding type III procollagen in induced liver fibrosis.
Kim Y, Peyrol S, So CK, Boyd CD, Csiszar K
J Cell Biochem. 1999
PubMed ID: 10022501
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High-efficiency full-length cDNA cloning.
Carninci P, Hayashizaki Y
Methods Enzymol. 1999
PubMed ID: 10349636
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Collagen II is essential for the removal of the notochord and the formation of intervertebral discs.
Aszódi A, Chan D, Hunziker E, Bateman JF, Fässler R
J Cell Biol. 1998
PubMed ID: 9832566
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Collagen mRNA expression during tissue development: the temporospacial order coordinates bone morphogenesis with collagen fiber formation.
Wurtz T, Ellerström C, Lundmark C, Christersson C
Matrix Biol. 1998
PubMed ID: 9822201
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Simple collagen-like peptides support platelet adhesion under static but not under flow conditions: interaction via alpha2 beta1 and von Willebrand factor with specific sequences in native collagen is a requirement to resist shear forces.
Verkleij MW, Morton LF, Knight CG, de Groot PG, Barnes MJ, Sixma JJ
Blood. 1998
PubMed ID: 9573018
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A type III collagen Gly559 to Arg helix mutation in Ehler's-Danlos syndrome type IV.
Bateman JF, Chiodo AA, Weng YM, Chan D, Haan E
Hum Mutat. 1998
PubMed ID: 9452103
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An orphan receptor tyrosine kinase family whose members serve as nonintegrin collagen receptors.
Shrivastava A, Radziejewski C, Campbell E, Kovac L, McGlynn M, Ryan TE, Davis S, Goldfarb MP, Glass DJ, Lemke G, Yancopoulos GD
Mol Cell. 1997
PubMed ID: 9659900
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The discoidin domain receptor tyrosine kinases are activated by collagen.
Vogel W, Gish GD, Alves F, Pawson T
Mol Cell. 1997
PubMed ID: 9659899
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Extracellular-matrix gene expression during mouse submandibular gland development.
Macauley SP, Tarnuzzer RW, Schultz GS, Chegini N, Oxford GE, Humphreys-Beher MG
Arch Oral Biol. 1997
PubMed ID: 9382709
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Developmental regulation of mRNA species for types II, IX and XI collagens during mouse embryogenesis.
Perälä M, Savontaus M, Metsäranta M, Vuorio E
Biochem J. 1997
PubMed ID: 9164858
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Type III collagen is crucial for collagen I fibrillogenesis and for normal cardiovascular development.
Liu X, Wu H, Byrne M, Krane S, Jaenisch R
Proc Natl Acad Sci U S A. 1997
PubMed ID: 9050868
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Mutations in the COL3A1 gene result in the Ehlers-Danlos syndrome type IV and alterations in the size and distribution of the major collagen fibrils of the dermis.
Smith LT, Schwarze U, Goldstein J, Byers PH
J Invest Dermatol. 1997
PubMed ID: 9036918
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Assignment of the human nebulin gene (NEB) to chromosome band 2q24.2 and the alpha 1 (III) collagen gene (COL3A1) to chromosome band 2q32.2 by in situ hybridization; the FRA2G common fragile site lies between the two genes in the 2q31 band.
Limongi MZ, Pelliccia F, Rocchi A
Cytogenet Cell Genet. 1997
PubMed ID: 9284930
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Mutations in fibrillar collagens (types I, II, III, and XI), fibril-associated collagen (type IX), and network-forming collagen (type X) cause a spectrum of diseases of bone, cartilage, and blood vessels.
Kuivaniemi H, Tromp G, Prockop DJ
Hum Mutat. 1997
PubMed ID: 9101290
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Interferon-gamma regulates collagen and fibronectin gene expression by transcriptional and post-transcriptional mechanisms.
Diaz A, Jiménez SA
Int J Biochem Cell Biol. 1997
PubMed ID: 9076960
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Genetic mapping of COL3A1 to bovine chromosome 2.
Fisher SR, Beever JE, Lewin HA
Mamm Genome. 1997
PubMed ID: 9021163
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A glycine (415)-to-serine substitution results in impaired secretion and decreased thermal stability of type III procollagen in a patient with Ehlers-Danlos syndrome type IV.
Anderson DW, Thakker-Varia S, Tromp G, Kuivaniemi H, Stolle CA
Hum Mutat. 1997
PubMed ID: 8990011
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Abnormal extracellular matrix in Ehlers-Danlos syndrome type IV due to the substitution of glycine 934 by glutamic acid in the triple helical domain of type III collagen.
McGrory J, Weksberg R, Thorner P, Cole WG
Clin Genet. 1996
PubMed ID: 9147870
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Type I, II, III, IV, V, and VI collagens serve as extracellular ligands for the isoforms of platelet-derived growth factor (AA, BB, and AB).
Somasundaram R, Schuppan D
J Biol Chem. 1996
PubMed ID: 8900172
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A high-resolution linkage map of the tight skin 2 (Tsk2) locus: a mouse model for scleroderma (SSc) and other cutaneous fibrotic diseases.
Christner PJ, Siracusa LD, Hawkins DF, McGrath R, Betz JK, Ball ST, Jimenez SA, Peters J
Mamm Genome. 1996
PubMed ID: 8678985
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Tumor necrosis factor-alpha inhibits collagen alpha1(I) gene expression and wound healing in a murine model of cachexia.
Buck M, Houglum K, Chojkier M
Am J Pathol. 1996
PubMed ID: 8686743
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Ehlers-Danlos syndrome type IV caused by Gly400Glu, Gly595Cys and Gly1003Asp substitutions in collagen III: clinical features, biochemical screening, and molecular confirmation.
Mackay K, Raghunath M, Superti-Furga A, Steinmann B, Dalgleish R
Clin Genet. 1996
PubMed ID: 8884076
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The gene encoding tripeptidyl peptidase II maps to chromosome 1 in the mouse.
Bermingham NA, McKay T, Hoyle J, Hernandez D, Martin JE, Fisher EM
Mamm Genome. 1996
PubMed ID: 8661741
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Report and abstracts of the Fourth International Workshop on Human Chromosome 2 Mapping 1996.
Spur NK, Bashir R, Bushby K, Cox A, Cox S, Hilde Brandt F, Hill N, Kao FT, Krols L, Marzella R, Miller N, Nothwang HG, Rocchi M, Sarfarazi M, Stratakis CA, Wallgren-Petterson C, Naylor S
Cytogenet Cell Genet. 1996
PubMed ID: 8751373
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A novel G499D substitution in the alpha 1(III) chain of type III collagen produces variable forms of Ehlers-Danlos syndrome type IV.
McGrory J, Costa T, Cole WG
Hum Mutat. 1996
PubMed ID: 8664902
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Coordinate patterns of expression of type I and III collagens during mouse development.
Niederreither K, D'Souza R, Metsäranta M, Eberspaecher H, Toman PD, Vuorio E, De Crombrugghe B
Matrix Biol. 1995
PubMed ID: 8785585
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Abnormal type III collagen produced by an exon-17-skipping mutation of the COL3A1 gene in Ehlers-Danlos syndrome type IV is not incorporated into the extracellular matrix.
Chiodo AA, Sillence DO, Cole WG, Bateman JF
Biochem J. 1995
PubMed ID: 7487954
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Myocardial infarction resulting from coronary artery dissection in an adolescent with Ehlers-Danlos syndrome type IV due to a type III collagen mutation.
Adès LC, Waltham RD, Chiodo AA, Bateman JF
Br Heart J. 1995
PubMed ID: 7546986
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The embryonic RNA helicase gene (ERH): a new member of the DEAD box family of RNA helicases.
Sowden J, Putt W, Morrison K, Beddington R, Edwards Y
Biochem J. 1995
PubMed ID: 8948440
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Efficient high-resolution genetic mapping of mouse interspersed repetitive sequence PCR products, toward integrated genetic and physical mapping of the mouse genome.
McCarthy L, Hunter K, Schalkwyk L, Riba L, Anson S, Mott R, Newell W, Bruley C, Bar I, Ramu E
Proc Natl Acad Sci U S A. 1995
PubMed ID: 7777502
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Onco-fetal/laminin-binding collagen from colon carcinoma: detection of new sequences.
Minafra IP, Andriolo M, Basiricò L, Aquino A, Minafra S, Boutillon MM, van der Rest M
Biochem Biophys Res Commun. 1995
PubMed ID: 7864881
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Localization of types I and III collagen and fibronectin in the developing mouse palatal shelves.
Ohsaki Y, Nagata K, Kurisu K
Acta Anat (Basel). 1995
PubMed ID: 8984825
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Efficient strategy for the detection of mutations in acrogeric Ehlers-Danlos syndrome type IV.
Johnson PH, Richards AJ, Lloyd JC, Pope FM, Hopkinson DA
Hum Mutat. 1995
PubMed ID: 8680408
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Chromosomal localization of opioid peptide and receptor genes in the mouse.
Giros B, Pohl M, Rochelle JM, Seldin MF
Life Sci. 1995
PubMed ID: 7752808
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Substitution of valine for glycine 793 in type III procollagen in Ehlers-Danlos syndrome type IV.
Tromp G, De Paepe A, Nuytinck L, Madhatheri S, Kuivaniemi H
Hum Mutat. 1995
PubMed ID: 7749417
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Type III collagen is a major component of interodontoblastic fibers of the developing mouse molar root.
Ohsaki Y, Nagata K
Anat Rec. 1994
PubMed ID: 7825727
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The mouse type-III procollagen-encoding gene: genomic cloning and complete DNA sequence.
Toman PD, de Crombrugghe B
Gene. 1994
PubMed ID: 7926795
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A family with Ehlers-Danlos syndrome type III/articular hypermobility syndrome has a glycine 637 to serine substitution in type III collagen.
Narcisi P, Richards AJ, Ferguson SD, Pope FM
Hum Mol Genet. 1994
PubMed ID: 7833919
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Mouse thioredoxin gene maps on chromosome 4, whereas its pseudogene maps on chromosome 1.
Taketo M, Matsui M, Rochelle JM, Yodoi J, Seldin MF
Genomics. 1994
PubMed ID: 8088797
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Age-related changes in collagen gene expression in the muscles of mdx dystrophic and normal mice.
Goldspink G, Fernandes K, Williams PE, Wells DJ
Neuromuscul Disord. 1994
PubMed ID: 7919967
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Towards high resolution maps of the mouse and human genomes--a facility for ordering markers to 0.1 cM resolution. European Backcross Collaborative Group.
Hum Mol Genet. 1994
PubMed ID: 8069308
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Substitution of glutamic acid for glycine 589 in the triple-helical domain of type III procollagen (COL3A1) in a family with variable phenotype of the Ehlers-Danlos syndrome type IV.
Madhatheri SL, Tromp G, Gustavson KH, Kuivaniemi H
Hum Mol Genet. 1994
PubMed ID: 7912131
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Cloning of cDNA for rat pro alpha 1(III) collagen mRNA. Different expression patterns of type I and type III collagen and fibronectin genes in experimental granulation tissue.
Glumoff V, Mäkelä JK, Vuorio E
Biochim Biophys Acta. 1994
PubMed ID: 8286415
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Characterization of a region-specific library of microclones in the vicinity of the Bcg and splotch loci on mouse chromosome 1.
Epstein DJ, Bardeesy N, Vidal S, Malo D, Weith A, Vekemans M, Gros P
Genomics. 1994
PubMed ID: 8188220
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Single-strand conformation polymorphism (SSCP) analysis of the COL3A1 gene detects a mutation that results in the substitution of glycine 1009 to valine and causes severe Ehlers-Danlos syndrome type IV.
Nuytinck L, De Paepe A, Renard JP, Adriaens F, Leroy J
Hum Mutat. 1994
PubMed ID: 8019562
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Exclusion of mutations in the gene for type III collagen (COL3A1) as a common cause of intracranial aneurysms or cervical artery dissections: results from sequence analysis of the coding sequences of type III collagen from 55 unrelated patients.
Kuivaniemi H, Prockop DJ, Wu Y, Madhatheri SL, Kleinert C, Earley JJ, Jokinen A, Stolle C, Majamaa K, Myllylä VV
Neurology. 1993
PubMed ID: 8255472
-
Physical and linkage mapping of the human and murine genes for the alpha 1 chain of type IX collagen (COL9A1).
Warman ML, Tiller GE, Polumbo PA, Seldin MF, Rochelle JM, Knoll JH, Cheng SD, Olsen BR
Genomics. 1993
PubMed ID: 8244386
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The substitution of glycine 661 by arginine in type III collagen produces mutant molecules with different thermal stabilities and causes Ehlers-Danlos syndrome type IV.
Richards A, Narcisi P, Lloyd J, Ferguson C, Pope FM
J Med Genet. 1993
PubMed ID: 8411057
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Parental somatic and germ-line mosaicism for a multiexon deletion with unusual endpoints in a type III collagen (COL3A1) allele produces Ehlers-Danlos syndrome type IV in the heterozygous offspring.
Milewicz DM, Witz AM, Smith AC, Manchester DK, Waldstein G, Byers PH
Am J Hum Genet. 1993
PubMed ID: 8317500
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Sequencing of cDNA from 50 unrelated patients reveals that mutations in the triple-helical domain of type III procollagen are an infrequent cause of aortic aneurysms.
Tromp G, Wu Y, Prockop DJ, Madhatheri SL, Kleinert C, Earley JJ, Zhuang J, Norrgård O, Darling RC, Abbott WM
J Clin Invest. 1993
PubMed ID: 8514866
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Single base mutation that substitutes glutamic acid for glycine 1021 in the COL3A1 gene and causes Ehlers-Danlos syndrome type IV.
Narcisi P, Wu Y, Tromp G, Earley JJ, Richards AJ, Pope FM, Kuivaniemi H
Am J Med Genet. 1993
PubMed ID: 8098182
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A T+6 to C+6 mutation in the donor splice site of COL3A1 IVS7 causes exon skipping and results in Ehlers-Danlos syndrome type IV.
Lloyd J, Narcisi P, Richards A, Pope FM
J Med Genet. 1993
PubMed ID: 8320698
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Collagen types I and III propeptides as markers of healing in chronic leg ulcers. A noninvasive method for the determination of procollagen propeptides in wound fluid--influence of growth hormone.
Rasmussen LH, Jensen LT, Avnstorp C, Karlsmark T, Peters K, Hørslev-Petersen K
Ann Surg. 1992
PubMed ID: 1466622
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Activation of expression of genes coding for extracellular matrix proteins in Tat-producing glioblastoma cells.
Taylor JP, Cupp C, Diaz A, Chowdhury M, Khalili K, Jimenez SA, Amini S
Proc Natl Acad Sci U S A. 1992
PubMed ID: 1409674
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Substitution of aspartate for glycine 1018 in the type III procollagen (COL3A1) gene causes type IV Ehlers-Danlos syndrome: the mutated allele is present in most blood leukocytes of the asymptomatic and mosaic mother.
Kontusaari S, Tromp G, Kuivaniemi H, Stolle C, Pope FM, Prockop DJ
Am J Hum Genet. 1992
PubMed ID: 1496983
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Identification and mapping of six microdissected genomic DNA probes to the proximal region of mouse chromosome 1.
Vidal SM, Epstein DJ, Malo D, Weith A, Vekemans M, Gros P
Genomics. 1992
PubMed ID: 1358796
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A single base mutation in the gene for type III collagen (COL3A1) converts glycine 847 to glutamic acid in a family with Ehlers-Danlos syndrome type IV. An unaffected family member is mosaic for the mutation.
Richards AJ, Ward PN, Narcisi P, Nicholls AC, Lloyd JC, Pope FM
Hum Genet. 1992
PubMed ID: 1352273
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A 27-bp deletion from one allele of the type III collagen gene (COL3A1) in a large family with Ehlers-Danlos syndrome type IV.
Richards AJ, Lloyd JC, Narcisi P, Ward PN, Nicholls AC, De Paepe A, Pope FM
Hum Genet. 1992
PubMed ID: 1370809
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A COL3A1 glycine 1006 to glutamic acid substitution in a patient with Ehlers-Danlos syndrome type IV detected by denaturing gradient gel electrophoresis.
Johnson PH, Richards AJ, Pope FM, Hopkinson DA
J Inherit Metab Dis. 1992
PubMed ID: 1357232
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Localization of growth arrest-specific genes on mouse chromosomes 1, 7, 8, 11, 13, and 16.
Colombo MP, Martinotti A, Howard TA, Schneider C, D'Eustachio P, Seldin MF
Mamm Genome. 1992
PubMed ID: 1347472
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Ehlers-Danlos syndrome type IV: phenotypic consequences of a splicing mutation in one COL3A1 allele.
Sillence DO, Chiodo AA, Campbell PE, Cole WG
J Med Genet. 1991
PubMed ID: 1757960
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Genetic causes of aortic aneurysms. Unlearning at least part of what the textbooks say.
Kuivaniemi H, Tromp G, Prockop DJ
J Clin Invest. 1991
PubMed ID: 1939638
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Characterisation of a glycine to valine substitution at amino acid position 910 of the triple helical region of type III collagen in a patient with Ehlers-Danlos syndrome type IV.
Richards AJ, Lloyd JC, Ward PN, De Paepe A, Narcisi P, Pope FM
J Med Genet. 1991
PubMed ID: 1895316
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Specific hybridization probes for mouse type I, II, III and IX collagen mRNAs.
Metsäranta M, Toman D, De Crombrugghe B, Vuorio E
Biochim Biophys Acta. 1991
PubMed ID: 2054384
-
G to T transversion at position +5 of a splice donor site causes skipping of the preceding exon in the type III procollagen transcripts of a patient with Ehlers-Danlos syndrome type IV.
Lee B, Vitale E, Superti-Furga A, Steinmann B, Ramirez F
J Biol Chem. 1991
PubMed ID: 1672129
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Differential expression of type I and type III collagen genes during tooth development.
Andujar MB, Couble P, Couble ML, Magloire H
Development. 1991
PubMed ID: 1879336
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A mutation in the gene for type III procollagen (COL3A1) in a family with aortic aneurysms.
Kontusaari S, Tromp G, Kuivaniemi H, Romanic AM, Prockop DJ
J Clin Invest. 1990
PubMed ID: 2243125
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Mapping of Col3a1 and Col6a3 to proximal murine chromosome 1 identifies conserved linkage of structural protein genes between murine chromosome 1 and human chromosome 2q.
Schurr E, Skamene E, Morgan K, Chu ML, Gros P
Genomics. 1990
PubMed ID: 1981051
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G to A polymorphism in exon 31 of the COL3A1 gene.
Zafarullah K, Kleinert C, Tromp G, Kuivaniemi H, Kontusaari S, Wu YL, Ganguly A, Prockop DJ
Nucleic Acids Res. 1990
PubMed ID: 2235526
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A base substitution at a splice site in the COL3A1 gene causes exon skipping and generates abnormal type III procollagen in a patient with Ehlers-Danlos syndrome type IV.
Cole WG, Chiodo AA, Lamande SR, Janeczko R, Ramirez F, Dahl HH, Chan D, Bateman JF
J Biol Chem. 1990
PubMed ID: 2145268
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Physical mapping by PFGE localizes the COL3A1 and COL5A2 genes to a 35-kb region on human chromosome 2.
Cutting GR, McGinniss MJ, Kasch LM, Tsipouras P, Antonarakis SE
Genomics. 1990
PubMed ID: 1979060
-
Identical G+1 to A mutations in three different introns of the type III procollagen gene (COL3A1) produce different patterns of RNA splicing in three variants of Ehlers-Danlos syndrome. IV. An explanation for exon skipping some mutations and not others.
Kuivaniemi H, Kontusaari S, Tromp G, Zhao MJ, Sabol C, Prockop DJ
J Biol Chem. 1990
PubMed ID: 2365710
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Inheritance of an RNA splicing mutation (G+ 1 IVS20) in the type III procollagen gene (COL3A1) in a family having aortic aneurysms and easy bruisability: phenotypic overlap between familial arterial aneurysms and Ehlers-Danlos syndrome type IV.
Kontusaari S, Tromp G, Kuivaniemi H, Ladda RL, Prockop DJ
Am J Hum Genet. 1990
PubMed ID: 2349939
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Colocalization of TGF-beta 1 and collagen I and III, fibronectin and glycosaminoglycans during lung branching morphogenesis.
Heine UI, Munoz EF, Flanders KC, Roberts AB, Sporn MB
Development. 1990
PubMed ID: 2209468
-
Single base mutation in the type III procollagen gene that converts the codon for glycine 883 to aspartate in a mild variant of Ehlers-Danlos syndrome IV.
Tromp G, Kuivaniemi H, Stolle C, Pope FM, Prockop DJ
J Biol Chem. 1989
PubMed ID: 2808425
-
Nucleotide and amino acid sequences of the entire human alpha 1 (III) collagen.
Janeczko RA, Ramirez F
Nucleic Acids Res. 1989
PubMed ID: 2780304
-
SPARC, a secreted protein associated with cellular proliferation, inhibits cell spreading in vitro and exhibits Ca+2-dependent binding to the extracellular matrix.
Sage H, Vernon RB, Funk SE, Everitt EA, Angello J
J Cell Biol. 1989
PubMed ID: 2745554
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Structure of cDNA clones coding for the entire prepro alpha 1 (III) chain of human type III procollagen. Differences in protein structure from type I procollagen and conservation of codon preferences.
Ala-Kokko L, Kontusaari S, Baldwin CT, Kuivaniemi H, Prockop DJ
Biochem J. 1989
PubMed ID: 2764886
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Cloning and analysis of the 5' portion of the human type-III procollagen gene (COL3A1).
Benson-Chanda V, Su MW, Weil D, Chu ML, Ramirez F
Gene. 1989
PubMed ID: 2777083
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A single base mutation that substitutes serine for glycine 790 of the alpha 1 (III) chain of type III procollagen exposes an arginine and causes Ehlers-Danlos syndrome IV.
Tromp G, Kuivaniemi H, Shikata H, Prockop DJ
J Biol Chem. 1989
PubMed ID: 2492273
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Human type III collagen 'variant' is a cDNA cloning artefact.
Molyneux K, Dalgleish R
Nucleic Acids Res. 1988
PubMed ID: 3211760
-
Nucleotide sequence of a cDNA coding for the amino-terminal region of human prepro alpha 1(III) collagen.
Toman PD, Ricca GA, de Crombrugghe B
Nucleic Acids Res. 1988
PubMed ID: 3405773
-
Evidence that the primary binding site of von Willebrand factor that mediates platelet adhesion on subendothelium is not collagen.
de Groot PG, Ottenhof-Rovers M, van Mourik JA, Sixma JJ
J Clin Invest. 1988
PubMed ID: 2839553
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Regulation of alpha 2(I), alpha 1(III), and alpha 2(V) collagen mRNAs by estradiol in the immature rat uterus.
Frankel FR, Hsu CY, Myers JC, Lin E, Lyttle CR, Komm B, Mohn K
DNA. 1988
PubMed ID: 2456904
-
Ehlers-Danlos syndrome type IV: a multi-exon deletion in one of the two COL3A1 alleles affecting structure, stability, and processing of type III procollagen.
Superti-Furga A, Gugler E, Gitzelmann R, Steinmann B
J Biol Chem. 1988
PubMed ID: 2834369
-
Human pro alpha 1(III) collagen: cDNA sequence for the 3' end.
Mankoo BS, Dalgleish R
Nucleic Acids Res. 1988
PubMed ID: 3357782
-
Characterization of binding properties of the myelin-associated glycoprotein to extracellular matrix constituents.
Fahrig T, Landa C, Pesheva P, Kühn K, Schachner M
EMBO J. 1987
PubMed ID: 2446864
-
Interaction of human thrombospondin with types I-V collagen: direct binding and electron microscopy.
Galvin NJ, Vance PM, Dixit VM, Fink B, Frazier WA
J Cell Biol. 1987
PubMed ID: 3571333
-
Complete nucleotide sequence of the N-terminal domains of the murine alpha-1 type-III collagen chain.
Wood L, Theriault N, Vogeli G
Gene. 1987
PubMed ID: 3443309
-
Human type III collagen gene expression is coordinately modulated with the type I collagen genes during fibroblast growth.
Miskulin M, Dalgleish R, Kluve-Beckerman B, Rennard SI, Tolstoshev P, Brantly M, Crystal RG
Biochemistry. 1986
PubMed ID: 3754462
-
Human alpha 1(III) and alpha 2(V) procollagen genes are located on the long arm of chromosome 2.
Emanuel BS, Cannizzaro LA, Seyer JM, Myers JC
Proc Natl Acad Sci U S A. 1985
PubMed ID: 3858826
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Isolation of cDNA and genomic clones encoding human pro-alpha 1 (III) collagen. Partial characterization of the 3' end region of the gene.
Chu ML, Weil D, de Wet W, Bernard M, Sippola M, Ramirez F
J Biol Chem. 1985
PubMed ID: 2579949
-
Identification of the promoter and first exon of the mouse alpha 1 (III) collagen gene.
Liau G, Mudryj M, de Crombrugghe B
J Biol Chem. 1985
PubMed ID: 3972847
-
Synthesis of an altered type III procollagen in a patient with type IV Ehlers-Danlos syndrome. A structural change in the alpha 1(III) chain which makes the protein more susceptible to proteinases.
Stolle CA, Pyeritz RE, Myers JC, Prockop DJ
J Biol Chem. 1985
PubMed ID: 2981879
-
Coordinate regulation of the levels of type III and type I collagen mRNA in most but not all mouse fibroblasts.
Liau G, Yamada Y, de Crombrugghe B
J Biol Chem. 1985
PubMed ID: 2981217
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Molecular cloning and carboxyl-propeptide analysis of human type III procollagen.
Loidl HR, Brinker JM, May M, Pihlajaniemi T, Morrow S, Rosenbloom J, Myers JC
Nucleic Acids Res. 1984
PubMed ID: 6096827
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Modulation of type I and type III collagen production in normal and mutant human skin fibroblasts by cell density, prostaglandin E2 and epidermal growth factor.
Steinmann BU, Abe S, Martin GR
Coll Relat Res. 1982
PubMed ID: 6295694
-
Covalent structure of collagen: amino acid sequence of alpha 1(III)-CB9 from type III collagen of human liver.
Seyer JM, Kang AH
Biochemistry. 1981
PubMed ID: 7016180
-
Covalent structure of collagen: amino acid sequence of alpha 1 (III)-CB5 from type III collagen of human liver.
Seyer JM, Mainardi C, Kang AH
Biochemistry. 1980
PubMed ID: 6246925
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Covalent structure of collagen: amino acid sequence of five consecutive CNBr peptides from type III collagen of human liver.
Seyer JM, Kang AH
Biochemistry. 1978
PubMed ID: 687591
-
Covalent structure of collagen: amino acid sequence of cyanogen bromide peptides from the amino-terminal segment of type III collagen of human liver.
Seyer JM, Kang AH
Biochemistry. 1977
PubMed ID: 557335
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