CCR1

  Summary from T1DBase   Top   Help
Gene Description:   chemokine (C-C motif) receptor 1
Synonyms:   CKR1, HM145, MIP1aR, CCR1, Cmkbr1, SCYAR1, CKR-1, Mip-1a-R, CD191, Ccr1, CMKBR1
Orthologs:   Human CCR1 (protein-coding), Mouse Ccr1 (protein-coding), Rat Ccr1 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1 Rat: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
3p21.31 Human chr3:45980673..46654132 0.67 77 rs333 rs11711054
expander Other Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr3:46243200..46249887 (6.69 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr9:123876959..123883525 (6.57 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr8:128693658..128699213 (5.55 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Not Detected Not Detected High High Not Detected Moderate Not Detected Low HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for CCR1:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
expander KEGG Network: 2
expander Biocarta: 1
expander Reactome: 7
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 19
  Publications   Top   Help
expander Type 1 Diabetes Publications: 2
expander Publications: 204
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:104618 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 1230 12768 57301
EnsEMBL Gene(s) ENSG00000163823 ENSMUSG00000025804 ENSRNOG00000006715
Unigene Hs.301921 Mm.274927 Rn.34673
Homologene CCR1 Ccr1 Ccr1
OMIM 601159 N/A N/A
GeneCards CCR1 N/A N/A
Beta Cell Genomics DT.443651 DT.55209071 N/A
Reactome P32246 N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:104618 N/A
WikiGenes 1230 12768 57301
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
View this page in archive site