CENPA
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(Human) GRCh37 - chr2:27008865..27023935 (157 kb) View in Genome Browser
(Mouse) NCBIM37 - chr5:30969150..30977200 (85 kb) View in Genome Browser
(Rat) RGSC3.4 - chr6:25686571..25693881 (7.31 kb) View in Genome Browser
HaemAtlas Expression Table for CENPA:
Expression Legend
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Cell Types Showing Expression: Available
Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
| Human | Mouse | Rat | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ductal cells | exocrine pancreas | pancreatic islets | primary beta cells | Pancreatic Islets MPSS | beta cell line | pancreatic islets | whole pancreas | alpha cell | beta cell line | pancreatic islets | primary beta cells | whole pancreas |
| no data | no data | |||||||||||
Expression Legend
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The Beta Cell Gene Atlas is a collection of almost all available public microarray data generated with pancreatic beta cells and related cell lines and types. The expression data comes from 131 array analyses derived from 28 experiments (open details in a new window). The basal (untreated cell) expression signal intensity values in each array were converted to ranks within the experiments; the highest value was used for genes represented by more than one probe. The rank values of genes in a given cell type were averaged with other calculated values from experiments performed with the same cell type. The rank transformation of the expression values enable comparison of gene expression across different organisms and tissues.
A red border around a cell indicates greater certainty in the data; specifically, the gene has >0.95 probability of being expressed in the tissue.
Tissues Showing Expression: Available
| Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Expression Legend
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| Signal intensity values were converted to ranks within the experiments. For genes represented by more than one probeset, we averaged the intensity signals for each probeset across all tissues and chose the probeset with the highest average value. The rank transformation of the expression values enables comparison of gene expression across different organisms and tissues. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Interactions Table for CENPA:The CENPA interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.
The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.
| Interactor | Interactor | Sources | Classification | Pubmed IDs |
| CENPA | CHAF1A | IntAct | empirical | 19410544 |
| CENPA | PARP2 | HPRD | empirical | 12217960 |
| CENPA | CENPA | BioGRID | empirical | 15009096 |
| CENPA | CENPB | BioGRID | empirical | 15009096 |
| CENPA | CENPE | Reactome | predicted | |
| CENPA | CENPF | Reactome | predicted | |
| CENPA | NUDC | Reactome | predicted | |
| CENPA | KIF2C | Reactome | predicted | |
| CENPA | ZWINT | Reactome | predicted | |
| CENPA | CBX3 | BioGRID | empirical | 15009096 |
| CENPA | PARP1 | HPRD, BioGRID | empirical | 12011073 |
| CENPA | SGOL2 | Reactome | predicted | |
| CENPA | SGOL1 | Reactome | predicted | |
| CENPA | DDB1 | BioGRID | empirical | 15009096 |
| CENPA | DIAPH1 | HPRD | empirical | 15085137 |
| CENPA | DIAPH2 | HPRD | empirical | 15085137 |
| CENPA | FBL | BioGRID | empirical | 15009096 |
| CENPA | SKA1 | Reactome | predicted | |
| CENPA | MAPRE1 | Reactome | predicted | |
| CENPA | ZC3H13 | BioGRID | empirical | 15009096 |
| CENPA | CLASP2 | Reactome | predicted | |
| CENPA | CLASP1 | Reactome | predicted | |
| CENPA | CENPI | BioGRID | empirical | 15009096 |
| CENPA | ABL1 | IntAct | empirical | 17474147 |
| CENPA | FYN | IntAct | empirical | 17474147 |
| CENPA | AHCTF1 | Reactome | predicted | |
| CENPA | KIAA1429 | BioGRID | empirical | 15009096 |
| CENPA | LOC284412 | BioGRID | empirical | 15009096 |
| CENPA | HIST1H1C | BioGRID | empirical | 15009096 |
| CENPA | HIST1H2AD | BioGRID | empirical | 15009096 |
| CENPA | HSPA8 | BioGRID | empirical | 15009096 |
| CENPA | INCENP | Reactome | predicted | |
| CENPA | KIF2A | Reactome | predicted | |
| CENPA | HPC3 | BioGRID | empirical | 15009096 |
| CENPA | NPM1 | IntAct, BioGRID | empirical | 19410544 19410545 |
| CENPA | PAFAH1B1 | Reactome | predicted | |
| CENPA | SRRT | BioGRID | empirical | 15009096 |
| CENPA | RSF1 | BioGRID | empirical | 15009096 |
| CENPA | PLK1 | Reactome | predicted | |
| CENPA | NDE1 | Reactome | predicted | |
| CENPA | ERCC6L | Reactome | predicted | |
| CENPA | CCDC99 | Reactome | predicted | |
| CENPA | PPP1CC | Reactome | predicted | |
| CENPA | HJURP | IntAct, BioGRID | empirical | 19410544 19410545 21478274 21980305 |
| CENPA | CENPN | BioGRID | empirical | 15009096 |
| CENPA | RCC2 | Reactome | predicted | |
| CENPA | CBX8 | BioGRID | empirical | 15009096 |
| CENPA | TAOK1 | Reactome | predicted | |
| CENPA | RANBP2 | Reactome | predicted | |
| CENPA | RANGAP1 | Reactome | predicted | |
| CENPA | RBBP4 | IntAct | empirical | 19410545 |
| CENPA | ACTB | BioGRID | empirical | 15009096 |
| CENPA | RING1 | BioGRID | empirical | 15009096 |
| CENPA | RPA1 | IntAct, BioGRID | empirical | 19410544 |
| CENPA | RPS27 | Reactome | predicted | |
| CENPA | CLIP1 | Reactome | predicted | |
| CENPA | CENPK | BioGRID | empirical | 15009096 |
| CENPA | BMI1 | BioGRID | empirical | 15009096 |
| CENPA | CENPH | BioGRID | empirical | 15009096 |
| CENPA | AURKC | BioGRID | empirical | 20663916 |
| CENPA | BUB1 | Reactome | predicted | |
| CENPA | XPO1 | Reactome | predicted | |
| CENPA | CENPM | BioGRID | empirical | 15009096 |
| CENPA | CENPO | BioGRID | empirical | 15009096 |
| CENPA | SHCBP1 | BioGRID | empirical | 15009096 |
| CENPA | CENPT | BioGRID | empirical | 15009096 |
| CENPA | B9D2 | Reactome | predicted | |
| CENPA | ZFP91 | BioGRID | empirical | 15009096 |
| CENPA | NDEL1 | Reactome | predicted | |
| CENPA | KIF18A | Reactome | predicted | |
| CENPA | HIST2H2BE | BioGRID | empirical | 15009096 |
| CENPA | HIST1H3C | HPRD, BioGRID | empirical | 15282608 |
| CENPA | HIST1H4A | BioGRID | empirical | 15009096 |
| CENPA | HIST1H4F | HPRD | empirical | 15282608 |
| CENPA | MAD1L1 | Reactome | predicted | |
| CENPA | KIF2B | Reactome | predicted | |
| CENPA | SMARCA5 | BioGRID | empirical | 15009096 |
| CENPA | RUVBL1 | IntAct, BioGRID | empirical | 19410544 |
| CENPA | AURKB | HPRD | empirical | 11756469 |
| CENPA | KIF23 | BioGRID | empirical | 15009096 |
| CENPA | WTAP | BioGRID | empirical | 15009096 |
| CENPA | CKAP5 | Reactome | predicted | |
| CENPA | CDC20 | Reactome | predicted |
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Type 1 Diabetes Publications: 1
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CENP-A, a protein required for chromosome segregation in mitosis, declines with age in islet but not exocrine cells.
Lee SH, Itkin-Ansari P, Levine F
Aging (Albany NY). 2010
PubMed ID: 21068465
Publications: 91
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Hepatitis B virus X protein mutant upregulates CENP-A expression in hepatoma cells.
Liu L, Li Y, Zhang S, Yu D, Zhu M
Oncol Rep. 2012
PubMed ID: 21956590
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Misregulation of Scm3p/HJURP causes chromosome instability in Saccharomyces cerevisiae and human cells.
Mishra PK, Au WC, Choy JS, Kuich PH, Baker RE, Foltz DR, Basrai MA
PLoS Genet. 2011
PubMed ID: 21980305
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Crystal structure of the human centromeric nucleosome containing CENP-A.
Tachiwana H, Kagawa W, Shiga T, Osakabe A, Miya Y, Saito K, Hayashi-Takanaka Y, Oda T, Sato M, Park SY, Kimura H, Kurumizaka H
Nature. 2011
PubMed ID: 21743476
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HJURP is a CENP-A chromatin assembly factor sufficient to form a functional de novo kinetochore.
Barnhart MC, Kuich PH, Stellfox ME, Ward JA, Bassett EA, Black BE, Foltz DR
J Cell Biol. 2011
PubMed ID: 21768289
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A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature. 2011
PubMed ID: 21677750
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Structure of a CENP-A-histone H4 heterodimer in complex with chaperone HJURP.
Hu H, Liu Y, Wang M, Fang J, Huang H, Yang N, Li Y, Wang J, Yao X, Shi Y, Li G, Xu RM
Genes Dev. 2011
PubMed ID: 21478274
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ShRNA-targeted centromere protein A inhibits hepatocellular carcinoma growth.
Li Y, Zhu Z, Zhang S, Yu D, Yu H, Liu L, Cao X, Wang L, Gao H, Zhu M
PLoS One. 2011
PubMed ID: 21423629
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Uracil DNA N-glycosylase promotes assembly of human centromere protein A.
Zeitlin SG, Chapados BR, Baker NM, Tai C, Slupphaug G, Wang JY
PLoS One. 2011
PubMed ID: 21399697
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A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M, Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E, Mehmeti S, Dagand E, Schrinner S, Nürnberger A, Schmidt K, Metz K, Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S, Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN, Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S, Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P, Reymond A, Davidson DR, Dollé P, Antonarakis SE, Yaspo ML, Martinez S, Baldock RA, Eichele G, Ballabio A
PLoS Biol. 2011
PubMed ID: 21267068
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Tetrameric organization of vertebrate centromeric nucleosomes.
Dimitriadis EK, Weber C, Gill RK, Diekmann S, Dalal Y
Proc Natl Acad Sci U S A. 2010
PubMed ID: 21059934
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Centromere protein A dynamics in human pluripotent stem cell self-renewal, differentiation and DNA damage.
Ambartsumyan G, Gill RK, Perez SD, Conway D, Vincent J, Dalal Y, Clark AT
Hum Mol Genet. 2010
PubMed ID: 20650959
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The immunodominant epitope of centromere-associated protein A displays homology with the transcription factor forkhead box E3 (FOXE3).
Perosa F, Vicenti C, Racanelli V, Leone P, Valentini G, Dammacco F
Clin Immunol. 2010
PubMed ID: 20630806
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The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres.
Sekulic N, Bassett EA, Rogers DJ, Black BE
Nature. 2010
PubMed ID: 20739937
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SUMOylation modulates the function of Aurora-B kinase.
Fernández-Miranda G, Pérez de Castro I, Carmena M, Aguirre-Portolés C, Ruchaud S, Fant X, Montoya G, Earnshaw WC, Malumbres M
J Cell Sci. 2010
PubMed ID: 20663916
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Dual recognition of CENP-A nucleosomes is required for centromere assembly.
Carroll CW, Milks KJ, Straight AF
J Cell Biol. 2010
PubMed ID: 20566683
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CENP-A reduction induces a p53-dependent cellular senescence response to protect cells from executing defective mitoses.
Maehara K, Takahashi K, Saitoh S
Mol Cell Biol. 2010
PubMed ID: 20160010
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Building centromeres: home sweet home or a nomadic existence?
Buscaino A, Allshire R, Pidoux A
Curr Opin Genet Dev. 2010
PubMed ID: 20206496
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HJURP binds CENP-A via a highly conserved N-terminal domain and mediates its deposition at centromeres.
Shuaib M, Ouararhni K, Dimitrov S, Hamiche A
Proc Natl Acad Sci U S A. 2010
PubMed ID: 20080577
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Molecular and evolutionary characteristics of the fraction of human alpha satellite DNA associated with CENP-A at the centromeres of chromosomes 1, 5, 19, and 21.
Pironon N, Puechberty J, Roizès G
BMC Genomics. 2010
PubMed ID: 20331851
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Double-strand DNA breaks recruit the centromeric histone CENP-A.
Zeitlin SG, Baker NM, Chapados BR, Soutoglou E, Wang JY, Berns MW, Cleveland DW
Proc Natl Acad Sci U S A. 2009
PubMed ID: 19717431
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CENP-H-containing complex facilitates centromere deposition of CENP-A in cooperation with FACT and CHD1.
Okada M, Okawa K, Isobe T, Fukagawa T
Mol Biol Cell. 2009
PubMed ID: 19625449
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Centromere assembly requires the direct recognition of CENP-A nucleosomes by CENP-N.
Carroll CW, Silva MC, Godek KM, Jansen LE, Straight AF
Nat Cell Biol. 2009
PubMed ID: 19543270
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Cancer-upregulated gene 2 (CUG2), a new component of centromere complex, is required for kinetochore function.
Kim H, Lee M, Lee S, Park B, Koh W, Lee DJ, Lim DS, Lee S
Mol Cells. 2009
PubMed ID: 19533040
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Mitotic control of kinetochore-associated dynein and spindle orientation by human Spindly.
Chan YW, Fava LL, Uldschmid A, Schmitz MH, Gerlich DW, Nigg EA, Santamaria A
J Cell Biol. 2009
PubMed ID: 19468067
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Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP, Mouse Genome Sequencing Consortium
PLoS Biol. 2009
PubMed ID: 19468303
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HJURP is a cell-cycle-dependent maintenance and deposition factor of CENP-A at centromeres.
Dunleavy EM, Roche D, Tagami H, Lacoste N, Ray-Gallet D, Nakamura Y, Daigo Y, Nakatani Y, Almouzni-Pettinotti G
Cell. 2009
PubMed ID: 19410545
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Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP.
Foltz DR, Jansen LE, Bailey AO, Yates JR, Bassett EA, Wood S, Black BE, Cleveland DW
Cell. 2009
PubMed ID: 19410544
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CENPA overexpression promotes genome instability in pRb-depleted human cells.
Amato A, Schillaci T, Lentini L, Di Leonardo A
Mol Cancer. 2009
PubMed ID: 20003272
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The C-terminal domain of CENP-C displays multiple and critical functions for mammalian centromere formation.
Trazzi S, Perini G, Bernardoni R, Zoli M, Reese JC, Musacchio A, Della Valle G
PLoS One. 2009
PubMed ID: 19503796
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Three-dimensional localization of CENP-A suggests a complex higher order structure of centromeric chromatin.
Marshall OJ, Marshall AT, Choo KH
J Cell Biol. 2008
PubMed ID: 19114591
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A quantitative atlas of mitotic phosphorylation.
Dephoure N, Zhou C, Villén J, Beausoleil SA, Bakalarski CE, Elledge SJ, Gygi SP
Proc Natl Acad Sci U S A. 2008
PubMed ID: 18669648
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Live-cell imaging reveals sustained centromere binding of CENP-T via CENP-A and CENP-B.
Hellwig D, Münch S, Orthaus S, Hoischen C, Hemmerich P, Diekmann S
J Biophotonics. 2008
PubMed ID: 19412974
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Aurora-C and Aurora-B share phosphorylation and regulation of CENP-A and Borealin during mitosis.
Slattery SD, Moore RV, Brinkley BR, Hall RM
Cell Cycle. 2008
PubMed ID: 18239465
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Cyclin B1 is localized to unattached kinetochores and contributes to efficient microtubule attachment and proper chromosome alignment during mitosis.
Chen Q, Zhang X, Jiang Q, Clarke PR, Zhang C
Cell Res. 2008
PubMed ID: 18195732
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Assembly of the inner kinetochore proteins CENP-A and CENP-B in living human cells.
Orthaus S, Biskup C, Hoffmann B, Hoischen C, Ohndorf S, Benndorf K, Diekmann S
Chembiochem. 2008
PubMed ID: 18072184
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The CENP-A NAC/CAD kinetochore complex controls chromosome congression and spindle bipolarity.
McClelland SE, Borusu S, Amaro AC, Winter JR, Belwal M, McAinsh AD, Meraldi P
EMBO J. 2007
PubMed ID: 18007590
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Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.
Wu C, Ma MH, Brown KR, Geisler M, Li L, Tzeng E, Jia CY, Jurisica I, Li SS
Proteomics. 2007
PubMed ID: 17474147
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Propagation of centromeric chromatin requires exit from mitosis.
Jansen LE, Black BE, Foltz DR, Cleveland DW
J Cell Biol. 2007
PubMed ID: 17339380
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Exquisite sensitivity of TP53 mutant and basal breast cancers to a dose-dense epirubicin-cyclophosphamide regimen.
Bertheau P, Turpin E, Rickman DS, Espié M, de Reyniès A, Feugeas JP, Plassa LF, Soliman H, Varna M, de Roquancourt A, Lehmann-Che J, Beuzard Y, Marty M, Misset JL, Janin A, de Thé H
PLoS Med. 2007
PubMed ID: 17388661
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hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes.
Lamesch P, Li N, Milstein S, Fan C, Hao T, Szabo G, Hu Z, Venkatesan K, Bethel G, Martin P, Rogers J, Lawlor S, McLaren S, Dricot A, Borick H, Cusick ME, Vandenhaute J, Dunham I, Hill DE, Vidal M
Genomics. 2007
PubMed ID: 17207965
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Centromere identity maintained by nucleosomes assembled with histone H3 containing the CENP-A targeting domain.
Black BE, Jansen LE, Maddox PS, Foltz DR, Desai AB, Shah JV, Cleveland DW
Mol Cell. 2007
PubMed ID: 17244537
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Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres.
Alonso A, Fritz B, Hasson D, Abrusan G, Cheung F, Yoda K, Radlwimmer B, Ladurner AG, Warburton PE
Genome Biol. 2007
PubMed ID: 17651496
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Priming of centromere for CENP-A recruitment by human hMis18alpha, hMis18beta, and M18BP1.
Fujita Y, Hayashi T, Kiyomitsu T, Toyoda Y, Kokubu A, Obuse C, Yanagida M
Dev Cell. 2007
PubMed ID: 17199038
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Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.
Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M
Cell. 2006
PubMed ID: 17081983
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The CENP-H-I complex is required for the efficient incorporation of newly synthesized CENP-A into centromeres.
Okada M, Cheeseman IM, Hori T, Okawa K, McLeod IX, Yates JR, Desai A, Fukagawa T
Nat Cell Biol. 2006
PubMed ID: 16622420
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The human CENP-A centromeric nucleosome-associated complex.
Foltz DR, Jansen LE, Black BE, Bailey AO, Yates JR, Cleveland DW
Nat Cell Biol. 2006
PubMed ID: 16622419
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Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
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The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
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Generation and annotation of the DNA sequences of human chromosomes 2 and 4.
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Nature. 2005
PubMed ID: 15815621
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Gene and alternative splicing annotation with AIR.
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Genome Res. 2005
PubMed ID: 15632090
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Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas.
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Nat Methods. 2004
PubMed ID: 15782199
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Nat Struct Mol Biol. 2004
PubMed ID: 15475964
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The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
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Genome Res. 2004
PubMed ID: 15489334
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Structural determinants for generating centromeric chromatin.
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Nature. 2004
PubMed ID: 15282608
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Cdc42 and mDia3 regulate microtubule attachment to kinetochores.
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Nature. 2004
PubMed ID: 15085137
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
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Nature. 2004
PubMed ID: 15057822
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Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase.
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Genes Cells. 2004
PubMed ID: 15009096
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Chromosome size and origin as determinants of the level of CENP-A incorporation into human centromeres.
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Chromosome Res. 2004
PubMed ID: 15702419
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CENP-A phosphorylation by Aurora-A in prophase is required for enrichment of Aurora-B at inner centromeres and for kinetochore function.
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Dev Cell. 2003
PubMed ID: 14667408
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Analysis of mammalian proteins involved in chromatin modification reveals new metaphase centromeric proteins and distinct chromosomal distribution patterns.
Craig JM, Earle E, Canham P, Wong LH, Anderson M, Choo KH
Hum Mol Genet. 2003
PubMed ID: 14519686
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
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Proc Natl Acad Sci U S A. 2003
PubMed ID: 14610273
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Overexpression and mistargeting of centromere protein-A in human primary colorectal cancer.
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Cancer Res. 2003
PubMed ID: 12839935
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Partially functional Cenpa-GFP fusion protein causes increased chromosome missegregation and apoptosis during mouse embryogenesis.
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Chromosome Res. 2003
PubMed ID: 12906131
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Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
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Proc Natl Acad Sci U S A. 2002
PubMed ID: 12477932
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Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Okazaki Y, Furuno M, Kasukawa T, Adachi J, Bono H, Kondo S, Nikaido I, Osato N, Saito R, Suzuki H, Yamanaka I, Kiyosawa H, Yagi K, Tomaru Y, Hasegawa Y, Nogami A, Schönbach C, Gojobori T, Baldarelli R, Hill DP, Bult C, Hume DA, Quackenbush J, Schriml LM, Kanapin A, Matsuda H, Batalov S, Beisel KW, Blake JA, Bradt D, Brusic V, Chothia C, Corbani LE, Cousins S, Dalla E, Dragani TA, Fletcher CF, Forrest A, Frazer KS, Gaasterland T, Gariboldi M, Gissi C, Godzik A, Gough J, Grimmond S, Gustincich S, Hirokawa N, Jackson IJ, Jarvis ED, Kanai A, Kawaji H, Kawasawa Y, Kedzierski RM, King BL, Konagaya A, Kurochkin IV, Lee Y, Lenhard B, Lyons PA, Maglott DR, Maltais L, Marchionni L, McKenzie L, Miki H, Nagashima T, Numata K, Okido T, Pavan WJ, Pertea G, Pesole G, Petrovsky N, Pillai R, Pontius JU, Qi D, Ramachandran S, Ravasi T, Reed JC, Reed DJ, Reid J, Ring BZ, Ringwald M, Sandelin A, Schneider C, Semple CA, Setou M, Shimada K, Sultana R, Takenaka Y, Taylor MS, Teasdale RD, Tomita M, Verardo R, Wagner L, Wahlestedt C, Wang Y, Watanabe Y, Wells C, Wilming LG, Wynshaw-Boris A, Yanagisawa M, Yang I, Yang L, Yuan Z, Zavolan M, Zhu Y, Zimmer A, Carninci P, Hayatsu N, Hirozane-Kishikawa T, Konno H, Nakamura M, Sakazume N, Sato K, Shiraki T, Waki K, Kawai J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Imotani K, Ishii Y, Itoh M, Kagawa I, Miyazaki A, Sakai K, Sasaki D, Shibata K, Shinagawa A, Yasunishi A, Yoshino M, Waterston R, Lander ES, Rogers J, Birney E, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group Phase I & II Team
Nature. 2002
PubMed ID: 12466851
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Poly(ADP-ribose) polymerase 2 localizes to mammalian active centromeres and interacts with PARP-1, Cenpa, Cenpb and Bub3, but not Cenpc.
Saxena A, Wong LH, Kalitsis P, Earle E, Shaffer LG, Choo KH
Hum Mol Genet. 2002
PubMed ID: 12217960
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Centromere proteins Cenpa, Cenpb, and Bub3 interact with poly(ADP-ribose) polymerase-1 protein and are poly(ADP-ribosyl)ated.
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J Biol Chem. 2002
PubMed ID: 12011073
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A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome.
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Science. 2002
PubMed ID: 12040188
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Figueroa J, Pendón C, Valdivia MM
BMC Genomics. 2002
PubMed ID: 12019018
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Mol Reprod Dev. 2001
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Functional annotation of a full-length mouse cDNA collection.
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Nature. 2001
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Curr Biol. 2000
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RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
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