T1DBase - A Bioinformatics Resource for Type 1 Diabetes Researchers

Gene Description:

calcium binding and coiled-coil domain 2

Synonyms:

Ndp52, Calcoco2, CALCOCO2, Ndp52l1, C77254, RGD1559974, NDP52, 2410154J16Rik

Orthologs:

Human CALCOCO2 (protein-coding), Mouse Calcoco2 (protein-coding), Rat Calcoco2 (protein-coding)

Sources

(Human) GRCh37 - chr17:46908350..46943884 (35.53 kb) View in Genome Browser

(Mouse) NCBIM37 - chr11:95960640..95973278 (12.64 kb) View in Genome Browser

(Rat) RGSC3.4 - chr10:84820832..84847065 (26.23 kb) View in Genome Browser

HaemAtlas Expression Table for CALCOCO2:

Cell Types Showing Expression: Available

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.

Human					Mouse			Rat
ductal cells	exocrine pancreas	pancreatic islets	primary beta cells	Pancreatic Islets MPSS	beta cell line	pancreatic islets	whole pancreas	alpha cell	beta cell line	pancreatic islets	primary beta cells	whole pancreas
								no data	no data	no data	no data	no data

Expression Legend

Tissues Showing Expression: Available

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.

Expression Legend

Interactions Table for CALCOCO2:

The CALCOCO2 interactions are shown below. Each row lists the two interactors, the sources which document this as an interaction, a classification of the interaction as empirical or predicted, and Pubmed IDs (if any) for the interaction.

The table of interactions is downloadable as a text file. Please note that the text file will not include data from HPRD due to restrictions imposed by the HPRD funding sources.

Interactor	Interactor	Sources	Classification	Pubmed IDs
CALCOCO2	CALCOCO2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	FASTK	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	KAT7	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	FAM107A	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	POLI	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	TP53RK	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	GABARAPL2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	RHPN1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	DAXX	HPRD	empirical	12033769
CALCOCO2	C1orf65	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	GABARAPL1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	TAB3	BioGRID	empirical	19820708
CALCOCO2	LSM4	HPRD, MINT, IntAct	empirical	16189514
CALCOCO2	ZNF451	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	RNF11	HPRD, MINT	empirical	15231748
CALCOCO2	CPNE7	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	APEX2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	ZNF638	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	KANSL1	HPRD, MINT, IntAct	empirical	16189514
CALCOCO2	TBK1	BioGRID	empirical	19820708 21903422
CALCOCO2	LGALS8	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	ABLIM1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	MYC	IntAct	empirical	21150319
CALCOCO2	ORC5	IntAct	empirical	21988832
CALCOCO2	GEMIN4	HPRD	empirical	12869526
CALCOCO2	TCEB3B	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	PIAS4	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	MTPAP	BioGRID	empirical	21903422
CALCOCO2	PEF1	IntAct	empirical	16189514
CALCOCO2	MCM10	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	C9orf86	HPRD, IntAct, BioGRID	empirical	16189514
CALCOCO2	DBNDD2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	PSMA1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	PTBP1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	MAVS	BioGRID	empirical	21903422
CALCOCO2	KIAA1407	BioGRID	empirical	21903422
CALCOCO2	PTBP2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	RPA2	IntAct	empirical	21988832
CALCOCO2	AZI2	BioGRID	empirical	21903422
CALCOCO2	SHC1	HPRD, IntAct, BioGRID	empirical	16189514
CALCOCO2	SMARCD1	HPRD, MINT, IntAct, BioGRID	empirical	16189514 21988832
CALCOCO2	SRI	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	VPS72	HPRD, MINT, IntAct	empirical	16189514
CALCOCO2	TRAF2	HPRD, MINT, IntAct	empirical	16189514
CALCOCO2	TRAF6	IntAct	empirical	21988832
CALCOCO2	UBC	BioGRID	empirical	19820708 21963094 21139048 21890473 21906983
CALCOCO2	ZNF205	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	C20orf195	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	ZNF426	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	PRRC2A	BioGRID	empirical	21903422
CALCOCO2	ZC2HC1C	HPRD, IntAct	empirical	16189514
CALCOCO2	ZNF408	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	FBXL18	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	CCDC33	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	TCL1A	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	C16orf48	HPRD, IntAct, BioGRID	empirical	16189514
CALCOCO2	MAP1LC3A	BioGRID	empirical	19820708
CALCOCO2	LNX1	HPRD, MINT, IntAct	empirical	16189514
CALCOCO2	PCGF1	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	IKBKG	IntAct	empirical	21988832
CALCOCO2	FBF1	HPRD, MINT	empirical	16189514
CALCOCO2	AP5B1	HPRD	empirical	16189514
CALCOCO2	ZNF101	HPRD, MINT, BioGRID	empirical	16189514
CALCOCO2	FXR2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	IKBKE	BioGRID	empirical	19820708
CALCOCO2	IQCB1	IntAct	empirical	21565611
CALCOCO2	TBKBP1	BioGRID	empirical	19820708 21903422
CALCOCO2	DAZAP2	HPRD, MINT, IntAct, BioGRID	empirical	16189514
CALCOCO2	GIT2	IntAct	empirical	21988832
CALCOCO2	RB1CC1	IntAct	empirical	21988832

View all

KEGG Network: None available

Biocarta: None available

Reactome: None available

NCI-Nature Pathway Interaction Database: None available

Gene Ontology: 12

Publications: 38

Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.
Li S, Wang L, Berman M, Kong YY, Dorf ME
Immunity. 2011
PubMed ID: 21903422
H2B homology region of major immediate-early protein 1 is essential for murine cytomegalovirus to disrupt nuclear domain 10, but is not important for viral replication in cell culture.
Cosme-Cruz R, Martínez FP, Perez KJ, Tang Q
J Gen Virol. 2011
PubMed ID: 21632568
p62 and NDP52 proteins target intracytosolic Shigella and Listeria to different autophagy pathways.
Mostowy S, Sancho-Shimizu V, Hamon MA, Simeone R, Brosch R, Johansen T, Cossart P
J Biol Chem. 2011
PubMed ID: 21646350
A conditional knockout resource for the genome-wide study of mouse gene function.
Skarnes WC, Rosen B, West AP, Koutsourakis M, Bushell W, Iyer V, Mujica AO, Thomas M, Harrow J, Cox T, Jackson D, Severin J, Biggs P, Fu J, Nefedov M, de Jong PJ, Stewart AF, Bradley A
Nature. 2011
PubMed ID: 21677750
The ubiquitin-binding adaptor proteins p62/SQSTM1 and NDP52 are recruited independently to bacteria-associated microdomains to target Salmonella to the autophagy pathway.
Cemma M, Kim PK, Brumell JH
Autophagy. 2011
PubMed ID: 21079414
Functional interaction of nuclear domain 10 and its components with cytomegalovirus after infections: cross-species host cells versus native cells.
Cosme RC, Martínez FP, Tang Q
PLoS One. 2011
PubMed ID: 21552525
The TBK1 adaptor and autophagy receptor NDP52 restricts the proliferation of ubiquitin-coated bacteria.
Thurston TL, Ryzhakov G, Bloor S, von Muhlinen N, Randow F
Nat Immunol. 2009
PubMed ID: 19820708
Lineage-specific biology revealed by a finished genome assembly of the mouse.
Church DM, Goodstadt L, Hillier LW, Zody MC, Goldstein S, She X, Bult CJ, Agarwala R, Cherry JL, DiCuccio M, Hlavina W, Kapustin Y, Meric P, Maglott D, Birtle Z, Marques AC, Graves T, Zhou S, Teague B, Potamousis K, Churas C, Place M, Herschleb J, Runnheim R, Forrest D, Amos-Landgraf J, Schwartz DC, Cheng Z, Lindblad-Toh K, Eichler EE, Ponting CP, Mouse Genome Sequencing Consortium
PLoS Biol. 2009
PubMed ID: 19468303
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Hansen GM, Markesich DC, Burnett MB, Zhu Q, Dionne KM, Richter LJ, Finnell RH, Sands AT, Zambrowicz BP, Abuin A
Genome Res. 2008
PubMed ID: 18799693
Toward a confocal subcellular atlas of the human proteome.
Barbe L, Lundberg E, Oksvold P, Stenius A, Lewin E, Björling E, Asplund A, Pontén F, Brismar H, Uhlén M, Andersson-Svahn H
Mol Cell Proteomics. 2008
PubMed ID: 18029348
T6BP and NDP52 are myosin VI binding partners with potential roles in cytokine signalling and cell adhesion.
Morriswood B, Ryzhakov G, Puri C, Arden SD, Roberts R, Dendrou C, Kendrick-Jones J, Buss F
J Cell Sci. 2007
PubMed ID: 17635994
hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes.
Lamesch P, Li N, Milstein S, Fan C, Hao T, Szabo G, Hu Z, Venkatesan K, Bethel G, Martin P, Rogers J, Lawlor S, McLaren S, Dricot A, Borick H, Cusick ME, Vandenhaute J, Dunham I, Hill DE, Vidal M
Genomics. 2007
PubMed ID: 17207965
DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.
Zody MC, Garber M, Adams DJ, Sharpe T, Harrow J, Lupski JR, Nicholson C, Searle SM, Wilming L, Young SK, Abouelleil A, Allen NR, Bi W, Bloom T, Borowsky ML, Bugalter BE, Butler J, Chang JL, Chen CK, Cook A, Corum B, Cuomo CA, de Jong PJ, DeCaprio D, Dewar K, FitzGerald M, Gilbert J, Gibson R, Gnerre S, Goldstein S, Grafham DV, Grocock R, Hafez N, Hagopian DS, Hart E, Norman CH, Humphray S, Jaffe DB, Jones M, Kamal M, Khodiyar VK, LaButti K, Laird G, Lehoczky J, Liu X, Lokyitsang T, Loveland J, Lui A, Macdonald P, Major JE, Matthews L, Mauceli E, McCarroll SA, Mihalev AH, Mudge J, Nguyen C, Nicol R, O'Leary SB, Osoegawa K, Schwartz DC, Shaw-Smith C, Stankiewicz P, Steward C, Swarbreck D, Venkataraman V, Whittaker CA, Yang X, Zimmer AR, Bradley A, Hubbard T, Birren BW, Rogers J, Lander ES, Nusbaum C
Nature. 2006
PubMed ID: 16625196
Towards a proteome-scale map of the human protein-protein interaction network.
Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M
Nature. 2005
PubMed ID: 16189514
Antisense transcription in the mammalian transcriptome.
Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M, Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P, Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J, Mattick J, Hume DA, Lipovich L, Batalov S, Engström PG, Mizuno Y, Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z, Lenhard B, Wahlestedt C, RIKEN Genome Exploration Research Group, Genome Science Group (Genome Network Project Core Group), FANTOM Consortium
Science. 2005
PubMed ID: 16141073
The transcriptional landscape of the mammalian genome.
Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N, Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K, Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ, Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R, Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T, Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M, Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M, Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A, Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L, Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L, Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K, Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R, Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V, Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL, Sandelin A, Schneider C, Schönbach C, Sekiguchi K, Semple CA, Seno S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D, Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y, Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM, Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T, Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H, Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K, Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y, Suzuki H, Kawai J, Hayashizaki Y, FANTOM Consortium, RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group)
Science. 2005
PubMed ID: 16141072
Gene and alternative splicing annotation with AIR.
Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M, Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail S, Li P, Sutton G
Genome Res. 2005
PubMed ID: 15632090
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG, Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI, Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C, Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T, Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB, Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K, Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T, Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH, Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC, Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL, Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M, Griffith OL, Krzywinski MI, Liao N, Morin R, Morrin R, Palmquist D, Petrescu AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S, Malek J, MGC Project Team
Genome Res. 2004
PubMed ID: 15489334
Functional proteomics mapping of a human signaling pathway.
Colland F, Jacq X, Trouplin V, Mougin C, Groizeleau C, Hamburger A, Meil A, Wojcik J, Legrain P, Gauthier JM
Genome Res. 2004
PubMed ID: 15231748
Formation of nuclear foci of the herpes simplex virus type 1 regulatory protein ICP4 at early times of infection: localization, dynamics, recruitment of ICP27, and evidence for the de novo induction of ND10-like complexes.
Everett RD, Sourvinos G, Leiper C, Clements JB, Orr A
J Virol. 2004
PubMed ID: 14747555
Complete sequencing and characterization of 21,243 full-length human cDNAs.
Ota T, Suzuki Y, Nishikawa T, Otsuki T, Sugiyama T, Irie R, Wakamatsu A, Hayashi K, Sato H, Nagai K, Kimura K, Makita H, Sekine M, Obayashi M, Nishi T, Shibahara T, Tanaka T, Ishii S, Yamamoto J, Saito K, Kawai Y, Isono Y, Nakamura Y, Nagahari K, Murakami K, Yasuda T, Iwayanagi T, Wagatsuma M, Shiratori A, Sudo H, Hosoiri T, Kaku Y, Kodaira H, Kondo H, Sugawara M, Takahashi M, Kanda K, Yokoi T, Furuya T, Kikkawa E, Omura Y, Abe K, Kamihara K, Katsuta N, Sato K, Tanikawa M, Yamazaki M, Ninomiya K, Ishibashi T, Yamashita H, Murakawa K, Fujimori K, Tanai H, Kimata M, Watanabe M, Hiraoka S, Chiba Y, Ishida S, Ono Y, Takiguchi S, Watanabe S, Yosida M, Hotuta T, Kusano J, Kanehori K, Takahashi-Fujii A, Hara H, Tanase TO, Nomura Y, Togiya S, Komai F, Hara R, Takeuchi K, Arita M, Imose N, Musashino K, Yuuki H, Oshima A, Sasaki N, Aotsuka S, Yoshikawa Y, Matsunawa H, Ichihara T, Shiohata N, Sano S, Moriya S, Momiyama H, Satoh N, Takami S, Terashima Y, Suzuki O, Nakagawa S, Senoh A, Mizoguchi H, Goto Y, Shimizu F, Wakebe H, Hishigaki H, Watanabe T, Sugiyama A, Takemoto M, Kawakami B, Yamazaki M, Watanabe K, Kumagai A, Itakura S, Fukuzumi Y, Fujimori Y, Komiyama M, Tashiro H, Tanigami A, Fujiwara T, Ono T, Yamada K, Fujii Y, Ozaki K, Hirao M, Ohmori Y, Kawabata A, Hikiji T, Kobatake N, Inagaki H, Ikema Y, Okamoto S, Okitani R, Kawakami T, Noguchi S, Itoh T, Shigeta K, Senba T, Matsumura K, Nakajima Y, Mizuno T, Morinaga M, Sasaki M, Togashi T, Oyama M, Hata H, Watanabe M, Komatsu T, Mizushima-Sugano J, Satoh T, Shirai Y, Takahashi Y, Nakagawa K, Okumura K, Nagase T, Nomura N, Kikuchi H, Masuho Y, Yamashita R, Nakai K, Yada T, Nakamura Y, Ohara O, Isogai T, Sugano S
Nat Genet. 2004
PubMed ID: 14702039
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J, BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta A, Hansen G, Hu Y, Huang W, Jaing C, Key BW, Kipp P, Kohlhauff B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N, Zhu Q, Person C, Sands AT
Proc Natl Acad Sci U S A. 2003
PubMed ID: 14610273
HCC-associated protein HCAP1, a variant of GEMIN4, interacts with zinc-finger proteins.
Di Y, Li J, Zhang Y, He X, Lu H, Xu D, Ling J, Huo K, Wan D, Li YY, Gu J
J Biochem. 2003
PubMed ID: 12869526
Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei.
Bortvin A, Eggan K, Skaletsky H, Akutsu H, Berry DL, Yanagimachi R, Page DC, Jaenisch R
Development. 2003
PubMed ID: 12620990
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.
Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD, Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T, Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL, Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P, Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH, Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW, Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J, Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M, Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW, Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J, Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U, Smailus DE, Schnerch A, Schein JE, Jones SJ, Marra MA, Mammalian Gene Collection Program Team
Proc Natl Acad Sci U S A. 2002
PubMed ID: 12477932
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
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Nature. 2002
PubMed ID: 12466851
Reorganization of nuclear domain 10 induced by papillomavirus capsid protein l2.
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Virology. 2002
PubMed ID: 12033769
Functional annotation of a full-length mouse cDNA collection.
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Nature. 2001
PubMed ID: 11217851
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
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Genome Res. 2000
PubMed ID: 11076861
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
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Methods Enzymol. 1999
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J Cell Biol. 1997
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Molecular characterization of NDP52, a novel protein of the nuclear domain 10, which is redistributed upon virus infection and interferon treatment.
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PubMed ID: 8125298

Model Organism Phenotype Links

	Human	Mouse	Rat
Entrez Gene	10241	76815	303479
EnsEMBL Gene(s)	ENSG00000136436	ENSMUSG00000006056	N/A
Unigene	Hs.514920	Mm.296049	N/A
Homologene	CALCOCO2	Calcoco2	Calcoco2
OMIM	604587	N/A	N/A
GeneCards	CALCOCO2	N/A	N/A
Beta Cell Genomics	DT.100016048 DT.117717 DT.206252 DT.96085432	DT.101223268 DT.101377907 DT.110514117 DT.110514124 DT.110514127 DT.97393557 DT.97401993	N/A
Reactome	N/A	N/A	N/A
Plasma Peptide Atlas	N/A	N/A	N/A
WikiGenes	10241	76815	303479

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