FLOT1

  Summary from T1DBase   Top   Help
Gene Description:   flotillin 1
Synonyms:   reggie-2, Rareg, FLOT1, Flot1
Orthologs:   Human FLOT1 (protein-coding), Mouse Flot1 (protein-coding), Rat Flot1 (protein-coding)
 
expander Sources
  Regions of Interest Overlapping this feature from T1DBase   Top   Help
Regions Overlapping this Feature:  Human: 1 Mouse: 1
expander Associated Regions: Available
Regions were calculated based on variants available for a large study with a convincing p-value (P < 5 x 10-8) +/- 0.1cM, and then these regions were examined for genes based on the current set of T1DBase gene spans.
Region Species Chromosomal Location Mb Number of genes Marker
MHC Human chr6:29910021..33498585 3.59 688
expander Linkage Regions: Available
  Gene Overview from T1DBase   Top   Help
expander (Human) GRCh37 - chr6:30695486..30710510 (152 kb)  View in Genome Browser
expander (Mouse) NCBIM37 - chr17:35960175..35969736 (9.56 kb)  View in Genome Browser
expander (Rat) RGSC3.4 - chr20:3065783..3076166 (10.38 kb)  View in Genome Browser
  Beta Cell Gene Atlas from T1DBase   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
Human Mouse Rat
ductal cells exocrine pancreas pancreatic islets primary beta cells Pancreatic Islets MPSS beta cell line pancreatic islets whole pancreas alpha cell beta cell line pancreatic islets primary beta cells whole pancreas
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  Tissue Expression   Top   Help

Users should be aware that the scale represents a rank within an experiment rather than a normalized expression signal.
 
/expression/atlas-PB_CD14+_Monocytes.png /expression/atlas-PB_CD56+_NK_Cells.png /expression/atlas-PB_CD19-_B_Cells.png /expression/atlas-PB_CD4+_T_Cells.png /expression/atlas-PB_CD8+_T_Cells.png /expression/atlas-PB_BDCA4+_Dendritic_Cells.png /expression/atlas-721_B_Lymphoblasts.png /expression/atlas-Lymph_Node.png /expression/atlas-Thymus.png /expression/atlas-Salivary_Gland.png /expression/atlas-Bone_Marrow.png /expression/atlas-BM_CD34+.png /expression/atlas-Heart.png /expression/atlas-Skeletal_Muscle.png /expression/atlas-Kidney.png /expression/atlas-Liver.png /expression/atlas-Lung.png /expression/atlas-Pancreas.png /expression/atlas-Pancreatic_Islets.png /expression/atlas-Trachea.png /expression/atlas-Pituitary.png /expression/atlas-Thyroid.png /expression/atlas-Amygdala.png /expression/atlas-Caudate_Nucleus.png /expression/atlas-Cerebellum.png /expression/atlas-Hypothalamus.png /expression/atlas-Spinal_cord.png /expression/atlas-Thalamus.png /expression/atlas-Skin.png /expression/atlas-Ovary.png /expression/atlas-Placenta.png /expression/atlas-Prostate.png /expression/atlas-Testis.png /expression/atlas-Uterus.png
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
expander Expression Legend
  HaemAtlas Expression   Top   Help
Symbols represent expression compared with the overall mean. Please click 'HaemAtlasProfile' link below for associated probe mappings and a detailed profile.
CD Marker EB MK CD66b CD14 CD19 CD8 CD4 CD56
Expression Pattern Moderate Moderate High Moderate Low Low Low Moderate HaemAtlasProfile
expander Expression Legend
  Interactions from T1DBase   Top   Help
expander Interactions Table for FLOT1:
  Cross-Reference to Pathways and GO Terms   Top   Help
expander View all
expander KEGG Network: 1
Biocarta: None available
Reactome: None available
NCI-Nature Pathway Interaction Database: None available
expander Gene Ontology: 12
  Publications   Top   Help
expander Publications: 85
  Model Organism Phenotype Links   Top   Help
This section provides links to model organism phenotype resources. Currently only to mouse phenotypes.
Organism Phenotype Resources
Mouse MGI:1100500 IKMC
  External Links   Top   Help
  Human Mouse Rat
Entrez Gene 10211 14251 64665
EnsEMBL Gene(s) ENSG00000137312 ENSG00000206379 ENSG00000206480 ENSG00000223654 ENSG00000224740 ENSG00000230143 ENSG00000232280 ENSG00000236271 ENSMUSG00000059714 ENSRNOG00000000826
Unigene Hs.179986 Mm.2931 Rn.9567
Homologene FLOT1 Flot1 Flot1
OMIM 606998 N/A N/A
GeneCards FLOT1 N/A N/A
Beta Cell Genomics DT.100669171 DT.121371139 DT.121371240 DT.40107534 DT.40198434 DT.493507 N/A
Reactome N/A N/A N/A
Plasma Peptide Atlas N/A N/A N/A
MGI N/A MGI:1100500 N/A
WikiGenes 10211 14251 64665
  External resources (dkCOIN) from NIDDK Consortium Interconnectivity Network   Top   Help
dkCOIN_click Relevant resources:
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